L898_g33300 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g33300 T309500_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Q6VU64_APLCA
M02423_2.00
Aplysia californica
NRGGTCAN

NTGACCYN
PBM
Weirauch et al.(2014)
pTH6055
0.795 0.514
Esr2
M01297_2.00
Mus musculus
NNRGGTCAH

DTGACCYNN
PBM
Lambert et al.(2019)
pTH3511
0.751 0.557
ESR2
M08154_2.00
Homo sapiens
RGGTCASNNWGNCCY

RGGNCWNNSTGACCY
ChIP-seq
Mathelier et al.(2014)
MA0258.2
0.751 0.557
ESR2
M09279_2.00
Homo sapiens
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_HUMAN.H11MO.0.A
0.751 0.557
Esr2
M09311_2.00
Mus musculus
RGGKCRVRSYGMCCY

RGGKCRSYBYGMCCY
Misc
Kulakovskiy et al.(2013)
ESR2_MOUSE.H11MO.0.A
0.751 0.557
ESR2
M11146_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5_01
0.751 0.557
ESR2
M11147_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ERBETA_Q5
0.751 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g33300.t1 Nuclear receptor 29 101

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
L889_g2044 Steinernema feltiae L889_g2044 N 0.929
L596_g16701 Steinernema carpocapsae L596_g16701 I 0.858
ANCCAN_21154 Ancylostoma caninum ANCCAN_21154 I 0.805
ANCDUO_09731 Ancylostoma duodenale ANCDUO_09731 I 0.805
OESDEN_17917 Oesophagostomum dentatum OESDEN_17917 I 0.805
ANCDUO_24991 Ancylostoma duodenale ANCDUO_24991 I 0.805
CGOC_0000164901 Cylicostephanus goldi CGOC_0000164901 I 0.800
LotgiG132166 Lottia gigantea LotgiG132166 I 0.799
NECAME_12149 Necator americanus NECAME_12149 I 0.799
Q6VU64_APLCA Aplysia californica Q6VU64_APLCA D 0.795
BGLB011780 Biomphalaria glabrata BGLB011780 I 0.795
NBR_0000818301 Nippostrongylus brasiliensis NBR_0000818301 I 0.795
Ocbimv22000656m.g Octopus bimaculoides Ocbimv22000656m.g I 0.795
CGI_10024100 Crassostrea gigas CGI_10024100 I 0.795
HPLM_0000917101 Haemonchus placei HPLM_0000917101 I 0.794
HCOI01895500 Haemonchus contortus HCOI01895500 I 0.794
HPBE_0001049901 Heligmosomoides bakeri HPBE_0001049901 I 0.789
ACAC_0000022201 Angiostrongylus cantonensis ACAC_0000022201 I 0.786
ACOC_0000678401 Angiostrongylus costaricensis ACOC_0000678401 I 0.786
DICVIV_00517 Dictyocaulus viviparus DICVIV_00517 I 0.786
TTRE_0000500401 Trichuris trichiura TTRE_0000500401 I 0.761
D918_00942 Trichuris suis D918_00942 I 0.760
csin110418 Clonorchis sinensis csin110418 I 0.758
T265_07403 Opisthorchis viverrini T265_07403 I 0.758
LDEC009878 Leptinotarsa decemlineata LDEC009878 I 0.755
ESR2 Vicugna pacos ENSVPAG00000004869 I 0.751
L898_g34078 Steinernema monticolum L898_g34078 I 0.751
ENSBTAP00000005899-D1 Bos grunniens ENSBTAP00000005899-D1 I 0.751
ESR2 Tursiops truncatus ENSTTRG00000000517 I 0.751
Myotis_brandtii_Esr2_10027148 Myotis brandtii Myotis_brandtii_Esr2_10027148 I 0.751
ESR2 Tupaia belangeri ENSTBEG00000001569 I 0.751
ESR2 Equus caballus ENSECAG00000024947 I 0.751
ESR2 Dasypus novemcinctus ENSDNOG00000013868 I 0.751
ESR2 Felis catus ENSFCAG00000009636 I 0.751
ESR2 Homo sapiens ENSG00000140009 D 0.751
ESR2 Loxodonta africana ENSLAFG00000017799 I 0.751
ESR2 Gorilla gorilla ENSGGOG00000003030 I 0.751
ENSCSAG00000013818 Chlorocebus sabaeus ENSCSAG00000013818 I 0.751
ESR2 Cavia porcellus ENSCPOG00000005703 I 0.751
ESR2 Bos taurus ENSBTAG00000004498 I 0.751
ENSAMEG00000003956 Ailuropoda melanoleuca ENSAMEG00000003956 I 0.751
ESR2 Canis familiaris ENSCAFG00000015846 I 0.751
ESR2 Choloepus hoffmanni ENSCHOG00000012987 I 0.751
ESR2 Callithrix jacchus ENSCJAG00000019502 I 0.751
ENSSTOG00000015102 Ictidomys tridecemlineatus ENSSTOG00000015102 I 0.751
ESR2 Microcebus murinus ENSMICG00000013003 I 0.751
ESR2 Pteropus vampyrus ENSPVAG00000017577 I 0.751
ESR2 Pan troglodytes ENSPTRG00000006432 I 0.751
Esr2 Rattus norvegicus ENSRNOG00000005343 I 0.751
ESR2 Sorex araneus ENSSARG00000004498 I 0.751
ESR2 Sus scrofa ENSSSCG00000005109 I 0.751
ENSPPYG00000005896 Pongo abelii ENSPPYG00000005896 I 0.751
ENSPANG00000021094 Papio anubis ENSPANG00000021094 I 0.751
ENSNLEG00000014123 Nomascus leucogenys ENSNLEG00000014123 I 0.751
Esr2 Mus musculus ENSMUSG00000021055 D 0.751
ENSMPUG00000006688 Mustela putorius furo ENSMPUG00000006688 I 0.751
ENSOARG00000021148 Ovis aries ENSOARG00000021148 I 0.751
ESR2 Otolemur garnettii ENSOGAG00000007831 I 0.751
ESR2 Oryctolagus cuniculus ENSOCUG00000005083 I 0.751
PTRK_0000641400 Parastrongyloides trichosuri PTRK_0000641400 I 0.747