L898_g4013 (Steinernema monticolum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 L898_g4013 T309513_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.851 0.493
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g4013.t1 Nuclear receptor 14 81

Links

Other Nuclear receptor family TFs
Other Steinernema monticolum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L898_g19019 Steinernema monticolum L898_g19019 I 0.916
L889_g6798 Steinernema feltiae L889_g6798 I 0.909
L889_g6797 Steinernema feltiae L889_g6797 I 0.896
L889_g6799 Steinernema feltiae L889_g6799 I 0.895
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.872
L898_g21763 Steinernema monticolum L898_g21763 I 0.865
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.865
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.865
L892_g14817 Steinernema scapterisci L892_g14817 I 0.862
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.856
CBG09567 Caenorhabditis briggsae CBG09567 I 0.851
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.851
L898_g4012 Steinernema monticolum L898_g4012 I 0.824
CRE30948 Caenorhabditis remanei CRE30948 I 0.815
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.808
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.808
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.808
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.804
L893_g18993 Steinernema glaseri L893_g18993 I 0.803
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.775
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.775
L898_g4015 Steinernema monticolum L898_g4015 N 0.763
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.761
L892_g2782 Steinernema scapterisci L892_g2782 I 0.761
L898_g19012 Steinernema monticolum L898_g19012 I 0.758
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.754