maker-nMf.1.1.scaf01765-snap-gene-0.13 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 maker-nMf.1.1.scaf01765-snap-gene-0.13 T309557_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-232
M00700_2.00 		Caenorhabditis elegans
NNTNTDWYN
NRWHANANN		 PBM
Narasimhan et al.(2015)
pTH10647 		0.779 0.500
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf01765-snap-gene-0.13-mRNA-1 Nuclear receptor 49 112

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc14668 Meloidogyne incognita Minc14668 I 0.976
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.973
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.970
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.933
L898_g12798 Steinernema monticolum L898_g12798 I 0.832
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.822
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.807
L889_g6696 Steinernema feltiae L889_g6696 I 0.807
SMUV_0000241501 Syphacia muris SMUV_0000241501 N 0.799
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.795
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.795
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.795
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.795
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.779
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.779
BXY_1091100 Bursaphelenchus xylophilus BXY_1091100 N 0.777
BXY_0690000 Bursaphelenchus xylophilus BXY_0690000 I 0.776
L892_g14834 Steinernema scapterisci L892_g14834 N 0.769
L898_g3512 Steinernema monticolum L898_g3512 I 0.768
CRE30948 Caenorhabditis remanei CRE30948 I 0.756
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.752