maker-nMf.1.1.scaf04006-snap-gene-0.9 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 maker-nMf.1.1.scaf04006-snap-gene-0.9 T309567_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf04006-snap-gene-0.9-mRNA-1 Nuclear receptor 62 113

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc15189 Meloidogyne incognita Minc15189 N 0.944
snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf04875-processed-gene-0.3 N 0.926
maker-nMf.1.1.scaf16687-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf16687-augustus-gene-0.4 N 0.925
Minc07964 Meloidogyne incognita Minc07964 N 0.923
Minc07962 Meloidogyne incognita Minc07962 N 0.923
Minc09140 Meloidogyne incognita Minc09140 N 0.907
Minc02054 Meloidogyne incognita Minc02054 N 0.907
augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf03109-processed-gene-0.1 N 0.900
Minc09142 Meloidogyne incognita Minc09142 N 0.893
Minc02055 Meloidogyne incognita Minc02055 N 0.893
maker-nMf.1.1.scaf06884-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf06884-augustus-gene-0.5 N 0.893
Minc09143 Meloidogyne incognita Minc09143 N 0.893
maker-nMf.1.1.scaf06148-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06148-augustus-gene-0.3 N 0.893
Minc15187 Meloidogyne incognita Minc15187 N 0.878
maker-nMf.1.1.scaf06196-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf06196-snap-gene-0.8 N 0.847
Minc04725 Meloidogyne incognita Minc04725 N 0.847
maker-nMf.1.1.scaf12853-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf12853-augustus-gene-0.4 N 0.842
maker-nMf.1.1.scaf03265-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03265-augustus-gene-0.7 N 0.828
Minc17464 Meloidogyne incognita Minc17464 N 0.818
Minc13321 Meloidogyne incognita Minc13321 N 0.818
maker-nMf.1.1.scaf15444-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf15444-snap-gene-0.4 N 0.807
MhA1_Contig790.frz3.gene5 Meloidogyne hapla MhA1_Contig790.frz3.gene5 N 0.807
MhA1_Contig790.frz3.gene2 Meloidogyne hapla MhA1_Contig790.frz3.gene2 N 0.807
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 N 0.807
MhA1_Contig2339.frz3.gene2 Meloidogyne hapla MhA1_Contig2339.frz3.gene2 N 0.800
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 N 0.783
MhA1_Contig2339.frz3.gene1 Meloidogyne hapla MhA1_Contig2339.frz3.gene1 N 0.770
augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf18998-processed-gene-0.0 N 0.769
Minc13448 Meloidogyne incognita Minc13448 N 0.767
maker-nMf.1.1.scaf11763-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11763-augustus-gene-0.3 N 0.767
maker-nMf.1.1.scaf14574-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf14574-augustus-gene-0.4 N 0.758
Minc14854 Meloidogyne incognita Minc14854 N 0.758