maker-nMf.1.1.scaf08255-snap-gene-0.4 (Meloidogyne floridensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 maker-nMf.1.1.scaf08255-snap-gene-0.4 T309581_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf08255-snap-gene-0.4-mRNA-1 Nuclear receptor 20 89

Links

Other Nuclear receptor family TFs
Other Meloidogyne floridensis TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
MhA1_Contig1386.frz3.gene10 Meloidogyne hapla MhA1_Contig1386.frz3.gene10 N 0.985
Minc18661 Meloidogyne incognita Minc18661 N 0.982
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0 N 0.972
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0 N 0.966
Minc14854 Meloidogyne incognita Minc14854 N 0.965
maker-nMf.1.1.scaf14574-augustus-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf14574-augustus-gene-0.4 N 0.965
maker-nMf.1.1.scaf15444-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf15444-snap-gene-0.4 N 0.964
Minc13448 Meloidogyne incognita Minc13448 N 0.962
maker-nMf.1.1.scaf11763-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf11763-augustus-gene-0.3 N 0.962
MhA1_Contig41.frz3.gene12 Meloidogyne hapla MhA1_Contig41.frz3.gene12 N 0.961
MhA1_Contig790.frz3.gene5 Meloidogyne hapla MhA1_Contig790.frz3.gene5 N 0.960
MhA1_Contig790.frz3.gene2 Meloidogyne hapla MhA1_Contig790.frz3.gene2 N 0.960
Minc18991 Meloidogyne incognita Minc18991 N 0.960
Minc04725 Meloidogyne incognita Minc04725 N 0.959
maker-nMf.1.1.scaf06196-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf06196-snap-gene-0.8 N 0.959
MhA1_Contig2339.frz3.gene2 Meloidogyne hapla MhA1_Contig2339.frz3.gene2 N 0.956
Minc03976 Meloidogyne incognita Minc03976 N 0.955
maker-nMf.1.1.scaf00198-snap-gene-0.24 Meloidogyne floridensis maker-nMf.1.1.scaf00198-snap-gene-0.24 N 0.955
maker-nMf.1.1.scaf03265-augustus-gene-0.7 Meloidogyne floridensis maker-nMf.1.1.scaf03265-augustus-gene-0.7 N 0.949
Minc17464 Meloidogyne incognita Minc17464 N 0.948
Minc13321 Meloidogyne incognita Minc13321 N 0.948
Minc17667 Meloidogyne incognita Minc17667 N 0.940
MhA1_Contig988.frz3.gene1 Meloidogyne hapla MhA1_Contig988.frz3.gene1 N 0.925
Minc07962 Meloidogyne incognita Minc07962 N 0.922
Minc07964 Meloidogyne incognita Minc07964 N 0.922
Minc09140 Meloidogyne incognita Minc09140 N 0.922
Minc15189 Meloidogyne incognita Minc15189 N 0.922
Minc02054 Meloidogyne incognita Minc02054 N 0.922
MhA1_Contig2339.frz3.gene1 Meloidogyne hapla MhA1_Contig2339.frz3.gene1 N 0.921
Minc02055 Meloidogyne incognita Minc02055 N 0.900
maker-nMf.1.1.scaf06884-augustus-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf06884-augustus-gene-0.5 N 0.900
Minc15187 Meloidogyne incognita Minc15187 N 0.900
Minc09142 Meloidogyne incognita Minc09142 N 0.900
Minc09143 Meloidogyne incognita Minc09143 N 0.900
maker-nMf.1.1.scaf06148-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06148-augustus-gene-0.3 N 0.887
MhA1_Contig392.frz3.gene14 Meloidogyne hapla MhA1_Contig392.frz3.gene14 N 0.864