MhA1_Contig691.frz3.gene13 (Meloidogyne hapla)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 MhA1_Contig691.frz3.gene13 T309670_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.871 0.571
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN

NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.793 0.500
nhr-154
M00698_2.00
Caenorhabditis elegans
NRBRYCAHWD

HWDTGRYVYN
PBM
Narasimhan et al.(2015)
pTH10650
0.757 0.471
CBG23380
M01296_2.00
Caenorhabditis briggsae
NDBDHHANWN

NWNTDDHVHN
PBM
Lambert et al.(2019)
pTH11449
0.755 0.471
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig691.frz3.gene13 Nuclear receptor 66 135

Links

Other Nuclear receptor family TFs
Other Meloidogyne hapla TFs

Invalid Input OrderBy

220 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action