nAv.1.0.1.g01891 (Acanthocheilonema viteae)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nAv.1.0.1.g01891 T309687_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr51
M06432_2.00
Drosophila melanogaster
AMRDATCARARGW

WCYTYTGATHYKT
B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012
0.978 0.900
GA30480
M02409_2.00
Drosophila pseudoobscura
RAGATCAM

KTGATCTY
PBM
Weirauch et al.(2014)
pTH5877
0.978 0.886
NR2E3
M00373_2.00
Homo sapiens
NRAGATCAMN

NKTGATCTYN
PBM
Barrera et al.(2016)
NR2E3_REF
0.968 0.843
Nr2e3
M02708_2.00
Mus musculus
AAGCTTD

HAAGCTT
SELEX
Mathelier et al.(2014)
MA0164.1
0.968 0.843
Nr2e3
M09328_2.00
Mus musculus
NAAGTCAAAARKCA

TGMYTTTTGACTTN
Misc
Kulakovskiy et al.(2013)
NR2E3_MOUSE.H11MO.0.C
0.968 0.843
NR2E3
M00372_2.00
Homo sapiens
AAAGATCA

TGATCTTT
PBM
Barrera et al.(2016)
NR2E3_R77Q
0.968 0.829
NR2E3
M00370_2.00
Homo sapiens
NNNWRABATCANN

NNTGATVTYWNNN
PBM
Barrera et al.(2016)
NR2E3_R76Q
0.963 0.829
NR2E3
M00371_2.00
Homo sapiens
NNNHAATWTRTNN

NNAYAWATTDNNN
PBM
Barrera et al.(2016)
NR2E3_R76W
0.957 0.829
NR2E3
M00369_2.00
Homo sapiens
NGGGRTCAHN

NDTGAYCCCN
PBM
Barrera et al.(2016)
NR2E3_G56R
0.950 0.829
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nAv.1.0.1.t01891-RA Nuclear receptor 153 223

Links

Other Nuclear receptor family TFs
Other Acanthocheilonema viteae TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BBA_01117 Beauveria bassiana BBA_01117 N 0.000
CH063_03084 Colletotrichum higginsianum CH063_03084 N 0.000
estExt_Genewise1Plus.C_sca_3_chr4_2_01346 Nectria haematococca estExt_Genewise1Plus.C_sca_3_chr4_2_01346 N 0.000
FFUJ_03177 Fusarium fujikuroi FFUJ_03177 N 0.000
FOXG_02133 Fusarium oxysporum FOXG_02133 N 0.000
FVEG_05296 Fusarium verticillioides FVEG_05296 N 0.000
NechaG68595 Fusarium solani NechaG68595 N 0.000
OCS_02752 Ophiocordyceps sinensis OCS_02752 N 0.000
S40288_03317 Stachybotrys chartarum S40288_03317 N 0.000
TRIATDRAFT_249561 Trichoderma atroviride TRIATDRAFT_249561 N 0.000
TRIREDRAFT_104994 Trichoderma reesei TRIREDRAFT_104994 N 0.000
TRIVIDRAFT_122602 Trichoderma virens TRIVIDRAFT_122602 N 0.000
VDAG_03747 Verticillium dahliae VDAG_03747 N 0.000
VDBG_02829 Verticillium alfalfae VDBG_02829 N 0.000
VDBG_02829 Verticillium albo atrum VDBG_02829 N 0.000
VHEMI05268 Torrubiella hemipterigena VHEMI05268 N 0.000