CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NBR_0001013301
(
Nippostrongylus brasiliensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NBR_0001013301
T309726_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.947
0.864
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0001013301-mRNA-1
Nuclear receptor
10
69
KNIFIKVHYGVLACFGCKGFFRRAVKDGRNKYVCRFERNFERNACRYCRFRKCLLVGMNP
Links
Other
Nuclear receptor
family TFs
Other
Nippostrongylus brasiliensis
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE12779
Caenorhabditis remanei
CRE12779
I
0.947
ANCCEY_05105
Ancylostoma ceylanicum
ANCCEY_05105
I
0.947
CBG06052
Caenorhabditis briggsae
CBG06052
I
0.947
nhr-7
Caenorhabditis elegans
WBGene00003606
D
0.947
HCOI00435200
Haemonchus contortus
HCOI00435200
I
0.943
CBN18797
Caenorhabditis brenneri
CBN18797
I
0.936
CBN26258
Caenorhabditis brenneri
CBN26258
I
0.936
BXY_0008800
Bursaphelenchus xylophilus
BXY_0008800
I
0.925
L596_g20569
Steinernema carpocapsae
L596_g20569
I
0.909
L893_g29388
Steinernema glaseri
L893_g29388
I
0.909
L898_g24498
Steinernema monticolum
L898_g24498
I
0.909
ACAC_0000409401
Angiostrongylus cantonensis
ACAC_0000409401
I
0.906
L889_g5777
Steinernema feltiae
L889_g5777
I
0.898
SMUV_0000859101
Syphacia muris
SMUV_0000859101
I
0.890
PEQ_0000633601
Parascaris equorum
PEQ_0000633601
I
0.888
SVE_0137800
Strongyloides venezuelensis
SVE_0137800
I
0.882
SSTP_0001234400
Strongyloides stercoralis
SSTP_0001234400
I
0.882
SPAL_0000110800
Strongyloides papillosus
SPAL_0000110800
I
0.882
PTRK_0000497300
Parastrongyloides trichosuri
PTRK_0000497300
I
0.855
ASIM_0001301101
Anisakis simplex
ASIM_0001301101
I
0.812
ASU_01199
Ascaris suum
ASU_01199
I
0.812