nDi.2.2.2.g02808 (Dirofilaria immitis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 nDi.2.2.2.g02808 T309757_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
tll
M02408_2.00
Drosophila melanogaster
NRASGTCAANNN

NNNTTGACSTYN
PBM
Weirauch et al.(2014)
pTH5714
0.983 0.814
tll
M03932_2.00
Drosophila melanogaster
NRAGTCAAAAGTCA

TGACTTTTGACTYN
SELEX
Nitta et al.(2015)
tll_1
0.983 0.814
tll
M03933_2.00
Drosophila melanogaster
NRAGTCAADAAGTCA

TGACTTHTTGACTYN
SELEX
Nitta et al.(2015)
tll_2
0.983 0.814
tll
M06558_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Mathelier et al.(2014)
MA0459.1
0.983 0.814
tll
M06424_2.00
Drosophila melanogaster
AAAGTYA

TRACTTT
B1H
Zhu et al.(2011)
tll_FlyReg_FBgn0003720
0.983 0.814
tll
M06425_2.00
Drosophila melanogaster
WAAAGTCAAM

KTTGACTTTW
B1H
Zhu et al.(2011)
tll_NAR_FBgn0003720
0.983 0.814
tll
M09688_2.00
Drosophila melanogaster
MAAAGTCAAH

DTTGACTTTK
Misc
Kulakovskiy et al.(2009)
tll
0.983 0.814
tll
M11190_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$TLL_Q6
0.983 0.814
dsf
M06431_2.00
Drosophila melanogaster
AAAAGTCANH

DNTGACTTTT
B1H
Zhu et al.(2011)
dsf_SANGER_5_FBgn0015381
0.895 0.729
NR2E1
M02394_2.00
Homo sapiens
NGAGGTCARN

NYTGACCTCN
PBM
Weirauch et al.(2014)
pTH6281
0.892 0.743
Nr2e1
M00814_2.00
Mus musculus
NNNGTYRNNN

NNNYRACNNN
PBM
Weirauch et al.(2013)
pTH2936
0.892 0.743
A1YGC6_PANPA
M02421_2.00
Pan paniscus
NNGTCANNN

NNNTGACNN
PBM
Weirauch et al.(2014)
pTH5561
0.892 0.743
NR2E1
M03364_2.00
Homo sapiens
WDAAGTCAA

TTGACTTHW
SELEX
Jolma et al.(2013)
NR2E1_1
0.892 0.743
NR2E1
M03365_2.00
Homo sapiens
RARTCAWDAAGTCA

TGACTTHWTGAYTY
SELEX
Jolma et al.(2013)
NR2E1_2
0.892 0.743
Nr2e1
M03427_2.00
Mus musculus
WDAAGTCAW

WTGACTTHW
SELEX
Jolma et al.(2013)
Nr2e1_1
0.892 0.743
Nr2e1
M03428_2.00
Mus musculus
RRGTCAWDAAGTCA

TGACTTHWTGACYY
SELEX
Jolma et al.(2013)
Nr2e1_2
0.892 0.743
NR2E1
M05585_2.00
Homo sapiens
NNAAGTCAN

NTGACTTNN
SELEX
Yin et al.(2017)
NR2E1_FL_HT-SELEX
0.892 0.743
NR2E1
M05586_2.00
Homo sapiens
NDAAGTCAN

NTGACTTHN
SELEX
Yin et al.(2017)
NR2E1_FL_Methyl-HT-SELEX
0.892 0.743
Hnf4
M03935_2.00
Drosophila melanogaster
RGGKCAAAGGTCA

TGACCTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_1
0.761 0.557
Hnf4
M03936_2.00
Drosophila melanogaster
RGGKCAAAGTYCA

TGRACTTTGMCCY
SELEX
Nitta et al.(2015)
Hnf4_2
0.761 0.557
Hnf4
M03937_2.00
Drosophila melanogaster
RGTVCAAAGKTCR

YGAMCTTTGBACY
SELEX
Nitta et al.(2015)
Hnf4_3
0.761 0.557
Hnf4
M03938_2.00
Drosophila melanogaster
RTGRACTTTGGACY

RGTCCAAAGTYCAY
SELEX
Nitta et al.(2015)
Hnf4_4
0.761 0.557
Hnf4
M06428_2.00
Drosophila melanogaster
DKNKWSSNGGGGTCA

TGACCCCNSSWMNMH
B1H
Zhu et al.(2011)
Hnf4_SANGER_10_FBgn0004914
0.761 0.557
Hnf4
M06429_2.00
Drosophila melanogaster
GGGGTCAH

DTGACCCC
B1H
Zhu et al.(2011)
Hnf4_SANGER_5_FBgn0004914
0.761 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nDi.2.2.2.t02808 Nuclear receptor 132 206

Links

Other Nuclear receptor family TFs
Other Dirofilaria immitis TFs

Invalid Input OrderBy

349 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action