CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OESDEN_00859
(
Oesophagostomum dentatum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
OESDEN_00859
T309905_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.867
0.600
nhr-34
M00690_2.00
Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN
PBM
Narasimhan et al.(2015)
pTH9907
0.765
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OESDEN_00859
Nuclear receptor
17
86
DVCVVCGDKAIGKHYGAVACNGCKGFFRRSVFQNLQYTCRFDKSCQIDKDHRNACRFCRFQKCLSDGMRP
Links
Other
Nuclear receptor
family TFs
Other
Oesophagostomum dentatum
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy