PTRK_0000861400 (Parastrongyloides trichosuri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PTRK_0000861400 T310024_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-49
M02413_2.00 		Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN		 PBM
Weirauch et al.(2014)
pTH5891 		0.778 0.571
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.759 0.529
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0000861400.1 Nuclear receptor 66 135

Links

Other Nuclear receptor family TFs
Other Parastrongyloides trichosuri TFs

107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.969
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.969
SSTP_0001170700 Strongyloides stercoralis SSTP_0001170700 I 0.968
L596_g23123 Steinernema carpocapsae L596_g23123 I 0.905
CRE00809 Caenorhabditis remanei CRE00809 I 0.901
L898_g23058 Steinernema monticolum L898_g23058 I 0.901
nhr-35 Caenorhabditis elegans WBGene00003628 I 0.901
CJA16040 Caenorhabditis japonica CJA16040 I 0.901
L889_g11570 Steinernema feltiae L889_g11570 I 0.901
L893_g21283 Steinernema glaseri L893_g21283 I 0.901
CBG14485 Caenorhabditis briggsae CBG14485 I 0.901
CBN11572 Caenorhabditis brenneri CBN11572 I 0.901
L892_g4134 Steinernema scapterisci L892_g4134 I 0.900
CRE26981 Caenorhabditis remanei CRE26981 I 0.881
PPA22443 Pristionchus pacificus PPA22443 I 0.873
scaffold107-EXSNAP2012.33 Pristionchus exspectatus scaffold107-EXSNAP2012.33 I 0.873
HCOI00592600 Haemonchus contortus HCOI00592600 I 0.871
OESDEN_04341 Oesophagostomum dentatum OESDEN_04341 I 0.869
RSKR_0001067400 Rhabditophanes kr3021 RSKR_0001067400 I 0.860
BXY_1375200 Bursaphelenchus xylophilus BXY_1375200 I 0.853
Minc17538 Meloidogyne incognita Minc17538 I 0.846
Minc13747 Meloidogyne incognita Minc13747 I 0.846
MhA1_Contig817.frz3.gene1 Meloidogyne hapla MhA1_Contig817.frz3.gene1 I 0.846
GPLIN_000284100 Globodera pallida GPLIN_000284100 I 0.842
TCLT_0000612301 Thelazia callipaeda TCLT_0000612301 I 0.840
DME_0000747901 Dracunculus medinensis DME_0000747901 I 0.839
ANCDUO_17367 Ancylostoma duodenale ANCDUO_17367 I 0.832
ANCCAN_19046 Ancylostoma caninum ANCCAN_19046 I 0.832
NECAME_01070 Necator americanus NECAME_01070 I 0.832
HCOI00052900 Haemonchus contortus HCOI00052900 I 0.832
DICVIV_13545 Dictyocaulus viviparus DICVIV_13545 I 0.832
ACOC_0000744201 Angiostrongylus costaricensis ACOC_0000744201 I 0.832
CBG23319 Caenorhabditis briggsae CBG23319 I 0.831
nLs.2.1.2.g04051 Litomosoides sigmodontis nLs.2.1.2.g04051 I 0.830
ASU_00971 Ascaris suum ASU_00971 I 0.828
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.828
WBGene00240560 Onchocerca volvulus WBGene00240560 I 0.825
nOo.2.0.1.g03859 Onchocerca ochengi nOo.2.0.1.g03859 I 0.825
LOAG_08636 Loa loa LOAG_08636 I 0.822
nAv.1.0.1.g09196 Acanthocheilonema viteae nAv.1.0.1.g09196 I 0.822
nDi.2.2.2.g09348 Dirofilaria immitis nDi.2.2.2.g09348 I 0.822
EEL_0000204901 Elaeophora elaphi EEL_0000204901 I 0.822
ASU_13587 Ascaris suum ASU_13587 I 0.821
CJA14248 Caenorhabditis japonica CJA14248 I 0.816
L898_g11608 Steinernema monticolum L898_g11608 I 0.813
L893_g263 Steinernema glaseri L893_g263 I 0.813
L889_g31970 Steinernema feltiae L889_g31970 I 0.813
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.813
ACAC_0001297301 Angiostrongylus cantonensis ACAC_0001297301 I 0.808
PTRK_0001163100 Parastrongyloides trichosuri PTRK_0001163100 I 0.799
SPAL_0001084500 Strongyloides papillosus SPAL_0001084500 I 0.799
SVE_0956400 Strongyloides venezuelensis SVE_0956400 I 0.799
SPAL_0001084400 Strongyloides papillosus SPAL_0001084400 I 0.799
SSTP_0001035300 Strongyloides stercoralis SSTP_0001035300 I 0.799
DME_0000693601 Dracunculus medinensis DME_0000693601 I 0.792
EVEC_0000477801 Enterobius vermicularis EVEC_0000477801 I 0.789
ASU_02770 Ascaris suum ASU_02770 I 0.789
SMUV_0000657401 Syphacia muris SMUV_0000657401 I 0.789
DME_0000591901 Dracunculus medinensis DME_0000591901 I 0.787
BTMF_0000217201 Brugia timori BTMF_0000217201 I 0.784
Bm4980 Brugia malayi Bm4980 I 0.784
PPA06637 Pristionchus pacificus PPA06637 I 0.783
LOAG_08615 Loa loa LOAG_08615 I 0.780
PEQ_0000391501 Parascaris equorum PEQ_0000391501 I 0.778
CBN18198 Caenorhabditis brenneri CBN18198 I 0.778
CBG03844 Caenorhabditis briggsae CBG03844 I 0.778
CBN20749 Caenorhabditis brenneri CBN20749 I 0.778
CRE08259 Caenorhabditis remanei CRE08259 I 0.778
nhr-49 Caenorhabditis elegans WBGene00003639 D 0.778
scaffold426-EXSNAP2012.35 Pristionchus exspectatus scaffold426-EXSNAP2012.35 I 0.778
scaffold605-EXSNAP2012.9 Pristionchus exspectatus scaffold605-EXSNAP2012.9 I 0.778
GPLIN_001175700 Globodera pallida GPLIN_001175700 I 0.778
ASU_03870 Ascaris suum ASU_03870 I 0.778
TCLT_0000461101 Thelazia callipaeda TCLT_0000461101 I 0.778
WBGene00236987 Onchocerca volvulus WBGene00236987 I 0.777
nOo.2.0.1.g02345 Onchocerca ochengi nOo.2.0.1.g02345 I 0.777
scaffold51-EXSNAP2012.23 Pristionchus exspectatus scaffold51-EXSNAP2012.23 I 0.772
PPA21285 Pristionchus pacificus PPA21285 I 0.772
nhr-101 Caenorhabditis elegans WBGene00003691 I 0.768
CBG22587 Caenorhabditis briggsae CBG22587 I 0.764
CRE10779 Caenorhabditis remanei CRE10779 I 0.764
CRE07033 Caenorhabditis remanei CRE07033 I 0.764
CBG00093 Caenorhabditis briggsae CBG00093 I 0.762
CBN07240 Caenorhabditis brenneri CBN07240 I 0.762
CRE24074 Caenorhabditis remanei CRE24074 I 0.762
CJA06153 Caenorhabditis japonica CJA06153 I 0.762
nhr-17 Caenorhabditis elegans WBGene00003616 I 0.762
L596_g11035 Steinernema carpocapsae L596_g11035 I 0.762
SPAL_0000841700 Strongyloides papillosus SPAL_0000841700 I 0.761
SVE_1799100 Strongyloides venezuelensis SVE_1799100 I 0.761
L893_g13285 Steinernema glaseri L893_g13285 I 0.761
SSTP_0000145700 Strongyloides stercoralis SSTP_0000145700 I 0.759
GPLIN_000337500 Globodera pallida GPLIN_000337500 I 0.759
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.759
PTRK_0000720500 Parastrongyloides trichosuri PTRK_0000720500 I 0.759
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.759
EVEC_0000027301 Enterobius vermicularis EVEC_0000027301 I 0.758
BXY_0631600 Bursaphelenchus xylophilus BXY_0631600 I 0.758
RSKR_0000342500 Rhabditophanes kr3021 RSKR_0000342500 I 0.757
L596_g12276 Steinernema carpocapsae L596_g12276 I 0.753
L892_g8671 Steinernema scapterisci L892_g8671 I 0.753
L898_g22454 Steinernema monticolum L898_g22454 I 0.753
L889_g7780 Steinernema feltiae L889_g7780 I 0.753
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.748
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.748
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.748
SMUV_0000708401 Syphacia muris SMUV_0000708401 I 0.745