CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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PTRK_0001132000
(
Parastrongyloides trichosuri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PTRK_0001132000
T310032_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.855
0.671
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN
NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.831
0.771
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB
VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.831
0.771
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTRK_0001132000.1
Nuclear receptor
46
115
KVCRICGDVAYSYNFNCVSCESCKAFFRRNALRKKEFKCPFSGKCEINLVSRRFCQKCRLEKCFKLGMKK
Links
Other
Nuclear receptor
family TFs
Other
Parastrongyloides trichosuri
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SSTP_0001272200
Strongyloides stercoralis
SSTP_0001272200
I
0.992
SVE_0958300
Strongyloides venezuelensis
SVE_0958300
I
0.992
SPAL_0000150000
Strongyloides papillosus
SPAL_0000150000
I
0.992
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.953
Minc18589
Meloidogyne incognita
Minc18589
I
0.953
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.953
Minc13296
Meloidogyne incognita
Minc13296
I
0.953
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.944
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.944
SMUV_0000312501
Syphacia muris
SMUV_0000312501
I
0.911
L893_g8292
Steinernema glaseri
L893_g8292
I
0.901
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.901
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.901
L898_g1817
Steinernema monticolum
L898_g1817
I
0.901
CRE19106
Caenorhabditis remanei
CRE19106
I
0.901
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.901
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.901
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.901
CJA03214
Caenorhabditis japonica
CJA03214
I
0.901
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.890
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.890
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.890
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.890
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.890
NECAME_01947
Necator americanus
NECAME_01947
I
0.890
KGM_05575
Danaus plexippus
KGM_05575
I
0.888
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.888
HMEL016865
Heliconius melpomene
HMEL016865
I
0.888
MCINX005291
Melitaea cinxia
MCINX005291
I
0.886
ISCW009328
Ixodes scapularis
ISCW009328
I
0.886
ADAC003041
Anopheles darlingi
ADAC003041
I
0.881
AALB008395
Anopheles albimanus
AALB008395
I
0.881
RPRC001794
Rhodnius prolixus
RPRC001794
I
0.879
AATE006049
Anopheles atroparvus
AATE006049
I
0.877
ASIS011648
Anopheles sinensis
ASIS011648
I
0.877
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.874
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.874
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.874
AMEM008752
Anopheles merus
AMEM008752
I
0.874
AMEC016766
Anopheles melas
AMEC016766
I
0.874
AMIN004130
Anopheles minimus
AMIN004130
I
0.874
AFUN010189
Anopheles funestus
AFUN010189
I
0.874
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.874
AMAM022585
Anopheles maculatus
AMAM022585
I
0.874
AARA011580
Anopheles arabiensis
AARA011580
I
0.874
AGAP004224
Anopheles gambiae
AGAP004224
I
0.874
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.872
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.870
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.870
GB52904
Apis mellifera
GB52904
I
0.870
NV10187
Nasonia vitripennis
NV10187
I
0.870
RSKR_0001015700
Rhabditophanes kr3021
RSKR_0001015700
I
0.863
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
0.862
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
0.862
HR96
Aedes aegypti
AAEL007202
I
0.862
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.861
GJ24344
Drosophila virilis
FBgn0211424
I
0.859
Hr96
Drosophila grimshawi
FBgn0020174
I
0.859
GI22223
Drosophila mojavensis
FBgn0144951
I
0.859
MDOA002084
Musca domestica
MDOA002084
I
0.859
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.859
LCUP002913
Lucilia cuprina
LCUP002913
I
0.859
GF16320
Drosophila ananassae
FBgn0093341
I
0.855
GD21158
Drosophila simulans
FBgn0192609
I
0.855
GE23543
Drosophila yakuba
FBgn0240719
I
0.855
GM17786
Drosophila sechellia
FBgn0172693
I
0.855
GG11347
Drosophila erecta
FBgn0103647
I
0.855
AFAF019254
Anopheles farauti
AFAF019254
I
0.855
Hr96
Drosophila melanogaster
FBgn0015240
D
0.855
GK14276
Drosophila willistoni
FBgn0216282
I
0.852
ADIR005534
Anopheles dirus
ADIR005534
I
0.851
YQE_04331
Dendroctonus ponderosae
YQE_04331
I
0.849
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.843
PTRK_0001378700
Parastrongyloides trichosuri
PTRK_0001378700
I
0.838
TC010645
Tribolium castaneum
TC010645
I
0.838
SSTP_0001172300
Strongyloides stercoralis
SSTP_0001172300
I
0.838
SVE_0996600
Strongyloides venezuelensis
SVE_0996600
I
0.838
SPAL_0001591300
Strongyloides papillosus
SPAL_0001591300
I
0.838
ACEP16468
Atta cephalotes
ACEP16468
I
0.836
CBN08904
Caenorhabditis brenneri
CBN08904
I
0.834
L889_g10853
Steinernema feltiae
L889_g10853
I
0.833
L596_g8771
Steinernema carpocapsae
L596_g8771
I
0.833
SMUV_0001002101
Syphacia muris
SMUV_0001002101
I
0.833
WUBG_12640
Wuchereria bancrofti
WUBG_12640
I
0.833
TCLT_0000386701
Thelazia callipaeda
TCLT_0000386701
I
0.833
nDi.2.2.2.g09652
Dirofilaria immitis
nDi.2.2.2.g09652
I
0.833
L898_g10498
Steinernema monticolum
L898_g10498
I
0.833
ASIM_0001146101
Anisakis simplex
ASIM_0001146101
I
0.833
WBGene00239037
Onchocerca volvulus
WBGene00239037
I
0.833
LOAG_10538
Loa loa
LOAG_10538
I
0.833
BXY_1418300
Bursaphelenchus xylophilus
BXY_1418300
I
0.833
ASU_07898
Ascaris suum
ASU_07898
I
0.833
DME_0000943901
Dracunculus medinensis
DME_0000943901
I
0.833
EVEC_0001257601
Enterobius vermicularis
EVEC_0001257601
I
0.833
ANCCAN_15412
Ancylostoma caninum
ANCCAN_15412
I
0.831
scaffold61-EXSNAP2012.64
Pristionchus exspectatus
scaffold61-EXSNAP2012.64
I
0.831
CBG04512
Caenorhabditis briggsae
CBG04512
I
0.831
TELCIR_05516
Teladorsagia circumcincta
TELCIR_05516
I
0.831
CBN31767
Caenorhabditis brenneri
CBN31767
I
0.831
ACOC_0000064201
Angiostrongylus costaricensis
ACOC_0000064201
I
0.831
daf-12
Caenorhabditis elegans
WBGene00000908
D
0.831
ANCDUO_17434
Ancylostoma duodenale
ANCDUO_17434
I
0.831
CRE07237
Caenorhabditis remanei
CRE07237
I
0.831
CJA11532
Caenorhabditis japonica
CJA11532
I
0.831
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.826
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.820
tetur17g03630
Tetranychus urticae
tetur17g03630
I
0.816
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
0.814
L893_g16225
Steinernema glaseri
L893_g16225
I
0.811
L892_g18386
Steinernema scapterisci
L892_g18386
I
0.809
PHUM460970
Pediculus humanus
PHUM460970
I
0.800
CBN26095
Caenorhabditis brenneri
CBN26095
I
0.799
SMAR007355
Strigamia maritima
SMAR007355
I
0.798
tetur34g00750
Tetranychus urticae
tetur34g00750
I
0.783
ANCCEY_01199
Ancylostoma ceylanicum
ANCCEY_01199
I
0.780
CLEC000589
Cimex lectularius
CLEC000589
I
0.777
HPLM_0001602501
Haemonchus placei
HPLM_0001602501
I
0.771