PTRK_0001312000 (Parastrongyloides trichosuri)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 PTRK_0001312000 T310038_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA

TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.988 0.757
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN

NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.961 0.614
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0001312000.1 Nuclear receptor 21 90

Links

Other Nuclear receptor family TFs
Other Parastrongyloides trichosuri TFs

282 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action