CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0002018201
(
Protopolystoma xenopodis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
PXEA_0002018201
T310056_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0002018201-mRNA-1
Nuclear receptor
151
190
RVCIVCGEPASGYNFDRLTCESCKAFFRRNALKPRDKVNF
Links
Other
Nuclear receptor
family TFs
Other
Protopolystoma xenopodis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Smp_036500
Schistosoma mansoni
Smp_036500
N
0.775
SPER_0002307101
Spirometra erinaceieuropaei
SPER_0002307101
N
0.775
SMRZ_0000423901
Schistosoma margrebowiei
SMRZ_0000423901
N
0.770
SCUD_0002273701
Schistosoma curassoni
SCUD_0002273701
N
0.770
T265_00230
Opisthorchis viverrini
T265_00230
N
0.753
HmN_000662400
Hymenolepis microstoma
HmN_000662400
N
0.746