scaffold180-EXSNAP2012.20 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold180-EXSNAP2012.20 T310201_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.745 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold180-EXSNAP2012.20 Nuclear receptor 65 136

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

34 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PPA02306 Pristionchus pacificus PPA02306 I 0.994
PTRK_0000775900 Parastrongyloides trichosuri PTRK_0000775900 I 0.775
SPAL_0001157400 Strongyloides papillosus SPAL_0001157400 I 0.775
SVE_1633700 Strongyloides venezuelensis SVE_1633700 I 0.775
SSTP_0000217700 Strongyloides stercoralis SSTP_0000217700 I 0.775
CJA13646 Caenorhabditis japonica CJA13646 I 0.766
L889_g29204 Steinernema feltiae L889_g29204 I 0.755
L596_g27086 Steinernema carpocapsae L596_g27086 I 0.755
L898_g4801 Steinernema monticolum L898_g4801 I 0.755
L893_g6878 Steinernema glaseri L893_g6878 I 0.755
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.754
scaffold178-EXSNAP2012.20 Pristionchus exspectatus scaffold178-EXSNAP2012.20 N 0.754
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.748
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.746
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.746
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.746
LOAG_18352 Loa loa LOAG_18352 I 0.746
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.746
Bm14724 Brugia malayi Bm14724 I 0.746
ASU_10946 Ascaris suum ASU_10946 I 0.746
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.746
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.746
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.746
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.746
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.746
L893_g29555 Steinernema glaseri L893_g29555 I 0.746
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.745
CBG07552 Caenorhabditis briggsae CBG07552 I 0.745
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.745
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.745
NECAME_04545 Necator americanus NECAME_04545 I 0.745
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.745
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.745
CRE15289 Caenorhabditis remanei CRE15289 I 0.745