CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold525-EXSNAP2012.13
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold525-EXSNAP2012.13
T310272_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold525-EXSNAP2012.13
Nuclear receptor
17
86
TQCIVCGAAAAGYNYGGASCARCKTFFRRAIIEKRVYNGCLRSGACDRDKNVKLCRSCRYDRCLRGGMNP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold608-EXSNAP2012.3
Pristionchus exspectatus
scaffold608-EXSNAP2012.3
N
0.969
scaffold608-EXSNAP2012.4
Pristionchus exspectatus
scaffold608-EXSNAP2012.4
N
0.938
scaffold525-EXSNAP2012.12
Pristionchus exspectatus
scaffold525-EXSNAP2012.12
N
0.938
PPA08387
Pristionchus pacificus
PPA08387
N
0.935
scaffold525-EXSNAP2012.17
Pristionchus exspectatus
scaffold525-EXSNAP2012.17
N
0.838
PPA08385
Pristionchus pacificus
PPA08385
N
0.771