scaffold52-EXSNAP2012.30 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold52-EXSNAP2012.30 T310274_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.989 0.929
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.807 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold52-EXSNAP2012.30 Nuclear receptor 28 97

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

144 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBG22587 Caenorhabditis briggsae CBG22587 I 0.989
CRE07033 Caenorhabditis remanei CRE07033 I 0.989
nhr-34 Caenorhabditis elegans WBGene00003627 D 0.989
CRE10779 Caenorhabditis remanei CRE10779 I 0.989
NBR_0000015501 Nippostrongylus brasiliensis NBR_0000015501 I 0.988
TELCIR_07460 Teladorsagia circumcincta TELCIR_07460 I 0.988
HCOI01927800 Haemonchus contortus HCOI01927800 I 0.988
ANCCEY_12461 Ancylostoma ceylanicum ANCCEY_12461 I 0.987
ANCCAN_22066 Ancylostoma caninum ANCCAN_22066 I 0.987
NECAME_02375 Necator americanus NECAME_02375 I 0.987
ANCDUO_15746 Ancylostoma duodenale ANCDUO_15746 I 0.987
SVUK_0000195901 Strongylus vulgaris SVUK_0000195901 I 0.987
SMUV_0000230901 Syphacia muris SMUV_0000230901 I 0.986
ASU_00971 Ascaris suum ASU_00971 I 0.986
EVEC_0000864401 Enterobius vermicularis EVEC_0000864401 I 0.986
L898_g11608 Steinernema monticolum L898_g11608 I 0.985
L596_g25910 Steinernema carpocapsae L596_g25910 I 0.985
L893_g263 Steinernema glaseri L893_g263 I 0.985
L889_g31970 Steinernema feltiae L889_g31970 I 0.985
CJA14248 Caenorhabditis japonica CJA14248 I 0.985
RSKR_0000178700 Rhabditophanes kr3021 RSKR_0000178700 I 0.982
PTRK_0000748600 Parastrongyloides trichosuri PTRK_0000748600 I 0.982
SSTP_0000860300 Strongyloides stercoralis SSTP_0000860300 I 0.980
SVE_0105800 Strongyloides venezuelensis SVE_0105800 I 0.980
SPAL_0000533900 Strongyloides papillosus SPAL_0000533900 I 0.980
Hba_17946 Heterorhabditis bacteriophora Hba_17946 I 0.978
CRE09416 Caenorhabditis remanei CRE09416 I 0.968
CBG14996 Caenorhabditis briggsae CBG14996 I 0.962
CRE07035 Caenorhabditis remanei CRE07035 I 0.950
nhr-138 Caenorhabditis elegans WBGene00003728 I 0.945
CBN00088 Caenorhabditis brenneri CBN00088 I 0.942
CBN21958 Caenorhabditis brenneri CBN21958 I 0.942
CJA18307 Caenorhabditis japonica CJA18307 I 0.942
L892_g3438 Steinernema scapterisci L892_g3438 I 0.939
L898_g9613 Steinernema monticolum L898_g9613 I 0.939
L889_g15424 Steinernema feltiae L889_g15424 I 0.938
L893_g33656 Steinernema glaseri L893_g33656 I 0.938
L596_g7829 Steinernema carpocapsae L596_g7829 I 0.937
CBN32300 Caenorhabditis brenneri CBN32300 I 0.934
CBG13142 Caenorhabditis briggsae CBG13142 I 0.934
CBN04415 Caenorhabditis brenneri CBN04415 I 0.934
CRE26423 Caenorhabditis remanei CRE26423 I 0.934
CRE07034 Caenorhabditis remanei CRE07034 I 0.933
CBG14997 Caenorhabditis briggsae CBG14997 I 0.930
CJA02727 Caenorhabditis japonica CJA02727 I 0.928
CJA19445 Caenorhabditis japonica CJA19445 I 0.918
nhr-62 Caenorhabditis elegans WBGene00003652 I 0.917
CBG03860 Caenorhabditis briggsae CBG03860 I 0.917
CBN05776 Caenorhabditis brenneri CBN05776 I 0.917
CRE08264 Caenorhabditis remanei CRE08264 I 0.917
HPLM_0001358001 Haemonchus placei HPLM_0001358001 I 0.916
HCOI01945300 Haemonchus contortus HCOI01945300 I 0.916
HCOI02126500 Haemonchus contortus HCOI02126500 I 0.916
Hba_17038 Heterorhabditis bacteriophora Hba_17038 I 0.916
nhr-21 Caenorhabditis elegans WBGene00003620 I 0.915
HPBE_0001438801 Heligmosomoides bakeri HPBE_0001438801 I 0.914
BXY_1082600 Bursaphelenchus xylophilus BXY_1082600 I 0.910
L596_g9904 Steinernema carpocapsae L596_g9904 I 0.909
L893_g5404 Steinernema glaseri L893_g5404 I 0.909
L889_g366 Steinernema feltiae L889_g366 I 0.909
L892_g17832 Steinernema scapterisci L892_g17832 I 0.909
CJA39530 Caenorhabditis japonica CJA39530 I 0.905
nhr-100 Caenorhabditis elegans WBGene00003690 I 0.903
L596_g26401 Steinernema carpocapsae L596_g26401 I 0.898
L898_g5338 Steinernema monticolum L898_g5338 I 0.898
L893_g6565 Steinernema glaseri L893_g6565 I 0.898
L889_g16305 Steinernema feltiae L889_g16305 I 0.898
L892_g17146 Steinernema scapterisci L892_g17146 I 0.898
CBN28641 Caenorhabditis brenneri CBN28641 I 0.890
HPBE_0001524301 Heligmosomoides bakeri HPBE_0001524301 I 0.890
nhr-4 Caenorhabditis elegans WBGene00003603 I 0.890
CBG03466 Caenorhabditis briggsae CBG03466 I 0.890
CRE29874 Caenorhabditis remanei CRE29874 I 0.890
HCOI01442000 Haemonchus contortus HCOI01442000 I 0.890
CJA14611 Caenorhabditis japonica CJA14611 I 0.890
ACOC_0000749401 Angiostrongylus costaricensis ACOC_0000749401 I 0.890
DICVIV_01644 Dictyocaulus viviparus DICVIV_01644 I 0.890
HCOI00094500 Haemonchus contortus HCOI00094500 I 0.890
ACAC_0000956101 Angiostrongylus cantonensis ACAC_0000956101 I 0.890
Ppa-nhr-61 Pristionchus pacificus PPA27722 I 0.887
nhr-118 Caenorhabditis elegans WBGene00003708 I 0.887
DICVIV_11073 Dictyocaulus viviparus DICVIV_11073 I 0.873
PTRK_0001236400 Parastrongyloides trichosuri PTRK_0001236400 I 0.871
nhr-61 Caenorhabditis elegans WBGene00003651 I 0.870
CJA06107 Caenorhabditis japonica CJA06107 I 0.870
scaffold277-EXSNAP2012.12 Pristionchus exspectatus scaffold277-EXSNAP2012.12 I 0.863
CBG04240 Caenorhabditis briggsae CBG04240 I 0.863
L596_g10816 Steinernema carpocapsae L596_g10816 I 0.853
L892_g23093 Steinernema scapterisci L892_g23093 I 0.853
CRE24933 Caenorhabditis remanei CRE24933 I 0.852
BXY_0412900 Bursaphelenchus xylophilus BXY_0412900 I 0.852
L898_g32368 Steinernema monticolum L898_g32368 I 0.851
L889_g2977 Steinernema feltiae L889_g2977 I 0.850
BXY_0053200 Bursaphelenchus xylophilus BXY_0053200 I 0.839
scaffold488-EXSNAP2012.17 Pristionchus exspectatus scaffold488-EXSNAP2012.17 I 0.836
CRE22212 Caenorhabditis remanei CRE22212 I 0.836
genemark-nMf.1.1.scaf00584-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf00584-processed-gene-0.4 I 0.828
PTRK_0001591500 Parastrongyloides trichosuri PTRK_0001591500 I 0.824
SVE_1768400 Strongyloides venezuelensis SVE_1768400 I 0.824
SSTP_0000230100 Strongyloides stercoralis SSTP_0000230100 I 0.824
SPAL_0001056000 Strongyloides papillosus SPAL_0001056000 I 0.824
nOo.2.0.1.g02628 Onchocerca ochengi nOo.2.0.1.g02628 I 0.821
nLs.2.1.2.g04526 Litomosoides sigmodontis nLs.2.1.2.g04526 I 0.821
nDi.2.2.2.g03974 Dirofilaria immitis nDi.2.2.2.g03974 I 0.821
OFLC_0000076301 Onchocerca flexuosa OFLC_0000076301 I 0.821
TCNE_0000582701 Toxocara canis TCNE_0000582701 I 0.821
CRE21925 Caenorhabditis remanei CRE21925 I 0.821
CBG22776 Caenorhabditis briggsae CBG22776 I 0.821
CBN08474 Caenorhabditis brenneri CBN08474 I 0.821
CJA14035 Caenorhabditis japonica CJA14035 I 0.821
nhr-14 Caenorhabditis elegans WBGene00003613 I 0.821
LOAG_07549 Loa loa LOAG_07549 I 0.821
nAv.1.0.1.g08447 Acanthocheilonema viteae nAv.1.0.1.g08447 I 0.821
EEL_0000265301 Elaeophora elaphi EEL_0000265301 I 0.821
Bm5457 Brugia malayi Bm5457 I 0.821
BTMF_0001565301 Brugia timori BTMF_0001565301 I 0.821
ASIM_0001548701 Anisakis simplex ASIM_0001548701 I 0.821
WBGene00239376 Onchocerca volvulus WBGene00239376 I 0.821
SMUV_0000835401 Syphacia muris SMUV_0000835401 I 0.821
TCLT_0000342401 Thelazia callipaeda TCLT_0000342401 I 0.821
scaffold1338-EXSNAP2012.3 Pristionchus exspectatus scaffold1338-EXSNAP2012.3 I 0.819
Ppa-nhr-14 Pristionchus pacificus PPA06980 I 0.819
L889_g25097 Steinernema feltiae L889_g25097 I 0.816
L898_g18440 Steinernema monticolum L898_g18440 I 0.816
L892_g186 Steinernema scapterisci L892_g186 I 0.816
L596_g9277 Steinernema carpocapsae L596_g9277 I 0.816
GPLIN_000327200 Globodera pallida GPLIN_000327200 I 0.802
L893_g6023 Steinernema glaseri L893_g6023 I 0.801
RSKR_0001175400 Rhabditophanes kr3021 RSKR_0001175400 I 0.800
scaffold395-EXSNAP2012.23 Pristionchus exspectatus scaffold395-EXSNAP2012.23 I 0.795
Ppa-nhr-3 Pristionchus pacificus PPA28597 I 0.795
BXY_0861500 Bursaphelenchus xylophilus BXY_0861500 I 0.795
genemark-nMf.1.1.scaf02603-processed-gene-0.3 Meloidogyne floridensis genemark-nMf.1.1.scaf02603-processed-gene-0.3 I 0.790
Minc11307 Meloidogyne incognita Minc11307 I 0.780
MhA1_Contig691.frz3.gene13 Meloidogyne hapla MhA1_Contig691.frz3.gene13 I 0.776
SVE_0697700 Strongyloides venezuelensis SVE_0697700 I 0.759
SPAL_0001238400 Strongyloides papillosus SPAL_0001238400 I 0.759
SMUV_0001036101 Syphacia muris SMUV_0001036101 I 0.756
ANCCAN_20599 Ancylostoma caninum ANCCAN_20599 I 0.752
HPBE_0001033901 Heligmosomoides bakeri HPBE_0001033901 I 0.752
OESDEN_00859 Oesophagostomum dentatum OESDEN_00859 I 0.752
HPLM_0000308401 Haemonchus placei HPLM_0000308401 I 0.752
CGOC_0000279901 Cylicostephanus goldi CGOC_0000279901 I 0.752
PPA14696 Pristionchus pacificus PPA14696 I 0.751