CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold532-EXSNAP2012.4
(
Pristionchus exspectatus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
scaffold532-EXSNAP2012.4
T310275_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
odr-7
M00697_2.00
Caenorhabditis elegans
NDWTTGTAGNN
NNCTACAAWHN
PBM
Narasimhan et al.(2015)
pTH9323
0.807
0.686
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold532-EXSNAP2012.4
Nuclear receptor
347
421
QECQVCMATTANGLHFGARTCAACAAFFRRSVADAKQYQCKGSQRCTNSAKDGTGYRKICRACRLQRCLQIGMQP
Links
Other
Nuclear receptor
family TFs
Other
Pristionchus exspectatus
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HPBE_0000822201
Heligmosomoides bakeri
HPBE_0000822201
I
0.907
HPLM_0000729201
Haemonchus placei
HPLM_0000729201
I
0.873
CBG00123
Caenorhabditis briggsae
CBG00123
I
0.834
SMUV_0000837101
Syphacia muris
SMUV_0000837101
I
0.826
ACOC_0001074701
Angiostrongylus costaricensis
ACOC_0001074701
I
0.823
ACAC_0000449001
Angiostrongylus cantonensis
ACAC_0000449001
I
0.823
DICVIV_10361
Dictyocaulus viviparus
DICVIV_10361
I
0.823
CRE14738
Caenorhabditis remanei
CRE14738
I
0.807
odr-7
Caenorhabditis elegans
WBGene00003854
D
0.807
ANCCAN_08211
Ancylostoma caninum
ANCCAN_08211
I
0.801
SPAL_0001051900
Strongyloides papillosus
SPAL_0001051900
I
0.793
SSTP_0000225800
Strongyloides stercoralis
SSTP_0000225800
I
0.793
SVE_1772700
Strongyloides venezuelensis
SVE_1772700
I
0.793
OESDEN_00181
Oesophagostomum dentatum
OESDEN_00181
I
0.781
PTRK_0001669000
Parastrongyloides trichosuri
PTRK_0001669000
N
0.776
Ppa-odr-7
Pristionchus pacificus
PPA00425
N
0.776
L596_g18571
Steinernema carpocapsae
L596_g18571
I
0.748
L892_g8133
Steinernema scapterisci
L892_g8133
I
0.748
L893_g9511
Steinernema glaseri
L893_g9511
I
0.748
L898_g1167
Steinernema monticolum
L898_g1167
I
0.748