scaffold532-EXSNAP2012.4 (Pristionchus exspectatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 scaffold532-EXSNAP2012.4 T310275_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
odr-7
M00697_2.00
Caenorhabditis elegans
NDWTTGTAGNN

NNCTACAAWHN
PBM
Narasimhan et al.(2015)
pTH9323
0.807 0.686
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold532-EXSNAP2012.4 Nuclear receptor 347 421

Links

Other Nuclear receptor family TFs
Other Pristionchus exspectatus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
odr-7 Caenorhabditis elegans WBGene00003854 D 0.807
CBG00123 Caenorhabditis briggsae CBG00123 I 0.834
L892_g8133 Steinernema scapterisci L892_g8133 I 0.748
L893_g9511 Steinernema glaseri L893_g9511 I 0.748
L898_g1167 Steinernema monticolum L898_g1167 I 0.748
OESDEN_00181 Oesophagostomum dentatum OESDEN_00181 I 0.781
SMUV_0000837101 Syphacia muris SMUV_0000837101 I 0.826
SPAL_0001051900 Strongyloides papillosus SPAL_0001051900 I 0.793
SSTP_0000225800 Strongyloides stercoralis SSTP_0000225800 I 0.793
L596_g18571 Steinernema carpocapsae L596_g18571 I 0.748
HPLM_0000729201 Haemonchus placei HPLM_0000729201 I 0.873
CRE14738 Caenorhabditis remanei CRE14738 I 0.807
ACAC_0000449001 Angiostrongylus cantonensis ACAC_0000449001 I 0.823
SVE_1772700 Strongyloides venezuelensis SVE_1772700 I 0.793
ACOC_0001074701 Angiostrongylus costaricensis ACOC_0001074701 I 0.823
ANCCAN_08211 Ancylostoma caninum ANCCAN_08211 I 0.801
DICVIV_10361 Dictyocaulus viviparus DICVIV_10361 I 0.823
HPBE_0000822201 Heligmosomoides bakeri HPBE_0000822201 I 0.907
Ppa-odr-7 Pristionchus pacificus PPA00425 N 0.776
PTRK_0001669000 Parastrongyloides trichosuri PTRK_0001669000 N 0.776