SMUV_0000230901 (Syphacia muris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SMUV_0000230901 T310403_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-34
M00690_2.00 		Caenorhabditis elegans
NNNNDHYRNN
NNYRDHNNNN		 PBM
Narasimhan et al.(2015)
pTH9907 		0.987 0.900
NR2E3
M00371_2.00 		Homo sapiens
NNNHAATWTRTNN
NNAYAWATTDNNN		 PBM
Barrera et al.(2016)
NR2E3_R76W 		0.796 0.557
GA30480
M02409_2.00 		Drosophila pseudoobscura
RAGATCAM
KTGATCTY		 PBM
Weirauch et al.(2014)
pTH5877 		0.772 0.543
Hr51
M06432_2.00 		Drosophila melanogaster
AMRDATCARARGW
WCYTYTGATHYKT		 B1H
Zhu et al.(2011)
Hr51_SANGER_5_FBgn0034012 		0.772 0.543
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMUV_0000230901-mRNA-1 Nuclear receptor 24 93

Links

Other Nuclear receptor family TFs
Other Syphacia muris TFs

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209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action