CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMUV_0000312501
(
Syphacia muris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMUV_0000312501
T310408_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR
YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.891
0.657
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMUV_0000312501-mRNA-1
Nuclear receptor
53
122
KICRVCGDKAFSYNFNVISCESCKAFFRRNANKQKEIRCPFNNSCVITKLSRRFCQRCRLQKCFDVGMKK
Links
Other
Nuclear receptor
family TFs
Other
Syphacia muris
TFs
99 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.982
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.982
CRE19106
Caenorhabditis remanei
CRE19106
I
0.982
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.982
CJA03214
Caenorhabditis japonica
CJA03214
I
0.982
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.980
NECAME_01947
Necator americanus
NECAME_01947
I
0.980
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.980
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.980
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.980
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.980
Minc18589
Meloidogyne incognita
Minc18589
I
0.976
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.976
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.976
Minc13296
Meloidogyne incognita
Minc13296
I
0.976
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.968
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.968
L898_g1817
Steinernema monticolum
L898_g1817
I
0.960
L893_g8292
Steinernema glaseri
L893_g8292
I
0.960
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.960
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.960
ISCW009328
Ixodes scapularis
ISCW009328
I
0.956
HPLM_0001602501
Haemonchus placei
HPLM_0001602501
I
0.952
MCINX005291
Melitaea cinxia
MCINX005291
I
0.933
PPAI005921
Phlebotomus papatasi
PPAI005921
I
0.919
AFAF019254
Anopheles farauti
AFAF019254
I
0.914
ADIR005534
Anopheles dirus
ADIR005534
I
0.911
PTRK_0001132000
Parastrongyloides trichosuri
PTRK_0001132000
I
0.911
BGIBMGA010782
Bombyx mori
BGIBMGA010782
I
0.910
KGM_05575
Danaus plexippus
KGM_05575
I
0.910
HMEL016865
Heliconius melpomene
HMEL016865
I
0.910
SSTP_0001272200
Strongyloides stercoralis
SSTP_0001272200
I
0.909
SVE_0958300
Strongyloides venezuelensis
SVE_0958300
I
0.909
SPAL_0000150000
Strongyloides papillosus
SPAL_0000150000
I
0.909
AALB008395
Anopheles albimanus
AALB008395
I
0.897
ADAC003041
Anopheles darlingi
ADAC003041
I
0.897
L798_15710
Zootermopsis nevadensis
L798_15710
I
0.897
AARA011580
Anopheles arabiensis
AARA011580
I
0.893
ASIS011648
Anopheles sinensis
ASIS011648
I
0.893
AMIN004130
Anopheles minimus
AMIN004130
I
0.893
AQUA008824
Anopheles quadriannulatus
AQUA008824
I
0.893
AATE006049
Anopheles atroparvus
AATE006049
I
0.893
ASTEI03690
Anopheles stephensi
ASTEI03690
I
0.893
ACOM033140
Anopheles coluzzii
ACOM033140
I
0.893
AMAM022585
Anopheles maculatus
AMAM022585
I
0.893
AMEC016766
Anopheles melas
AMEC016766
I
0.893
AMEM008752
Anopheles merus
AMEM008752
I
0.893
AFUN010189
Anopheles funestus
AFUN010189
I
0.893
AGAP004224
Anopheles gambiae
AGAP004224
I
0.893
ACUA008166
Anopheles culicifacies
ACUA008166
I
0.893
AEPI000232
Anopheles epiroticus
AEPI000232
I
0.891
GJ24344
Drosophila virilis
FBgn0211424
I
0.891
GG11347
Drosophila erecta
FBgn0103647
I
0.891
GI22223
Drosophila mojavensis
FBgn0144951
I
0.891
GM17786
Drosophila sechellia
FBgn0172693
I
0.891
GD21158
Drosophila simulans
FBgn0192609
I
0.891
GF16320
Drosophila ananassae
FBgn0093341
I
0.891
GA11197
Drosophila pseudoobscura
FBgn0071252
I
0.891
MDOA002084
Musca domestica
MDOA002084
I
0.891
GE23543
Drosophila yakuba
FBgn0240719
I
0.891
Hr96
Drosophila melanogaster
FBgn0015240
D
0.891
Hr96
Drosophila grimshawi
FBgn0020174
I
0.891
LCUP002913
Lucilia cuprina
LCUP002913
I
0.891
LDEC005794
Leptinotarsa decemlineata
LDEC005794
I
0.890
CPIJ016038
Culex quinquefasciatus
CPIJ016038
I
0.888
CpipJ_CPIJ016038
Culex pipiens
CpipJ_CPIJ016038
I
0.888
HR96
Aedes aegypti
AAEL007202
I
0.888
GK14276
Drosophila willistoni
FBgn0216282
I
0.885
HHAL000201-PA
Halyomorpha halys
HHAL000201-PA
I
0.883
YQE_04331
Dendroctonus ponderosae
YQE_04331
I
0.881
tetur17g03630
Tetranychus urticae
tetur17g03630
I
0.879
PTRK_0000134600
Parastrongyloides trichosuri
PTRK_0000134600
N
0.872
Cflo_03542--XP_624213.2_APIME
Camponotus floridanus
Cflo_03542--XP_624213.2_APIME
I
0.871
Hsal_04850--XP_624213.2_APIME
Harpegnathos saltator
Hsal_04850--XP_624213.2_APIME
I
0.871
NV10187
Nasonia vitripennis
NV10187
I
0.871
CBN26095
Caenorhabditis brenneri
CBN26095
I
0.871
GB52904
Apis mellifera
GB52904
I
0.871
tetur34g00750
Tetranychus urticae
tetur34g00750
I
0.870
TC010645
Tribolium castaneum
TC010645
I
0.870
DAPPUDRAFT_303110
Daphnia pulex
DAPPUDRAFT_303110
I
0.865
ACOC_0000352001
Angiostrongylus costaricensis
ACOC_0000352001
N
0.863
CLEC000589
Cimex lectularius
CLEC000589
I
0.852
SMAR007355
Strigamia maritima
SMAR007355
I
0.846
Bm3787
Brugia malayi
Bm3787
I
0.845
EEL_0000817201
Elaeophora elaphi
EEL_0000817201
I
0.845
WUBG_13334
Wuchereria bancrofti
WUBG_13334
I
0.845
RPRC001794
Rhodnius prolixus
RPRC001794
I
0.844
ACEP16468
Atta cephalotes
ACEP16468
I
0.843
nAv.1.0.1.g10286
Acanthocheilonema viteae
nAv.1.0.1.g10286
I
0.831
L596_g25556
Steinernema carpocapsae
L596_g25556
I
0.831
PHUM460970
Pediculus humanus
PHUM460970
I
0.830
nDi.2.2.2.g04518
Dirofilaria immitis
nDi.2.2.2.g04518
I
0.807
L892_g14860
Steinernema scapterisci
L892_g14860
I
0.803
L893_g3995
Steinernema glaseri
L893_g3995
I
0.791
scaffold889-EXSNAP2012.10
Pristionchus exspectatus
scaffold889-EXSNAP2012.10
I
0.770
Ppa-nhr-8
Pristionchus pacificus
PPA17111
I
0.767
RSKR_0001015700
Rhabditophanes kr3021
RSKR_0001015700
I
0.761
L889_g7248
Steinernema feltiae
L889_g7248
I
0.759
tetur30g01210
Tetranychus urticae
tetur30g01210
N
0.754