CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPAL_0000038800
(
Strongyloides papillosus
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SPAL_0000038800
T310471_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-49
M02413_2.00
Caenorhabditis elegans
NNNNWNHAN
NTDNWNNNN
PBM
Weirauch et al.(2014)
pTH5891
0.877
0.500
NR6A1
M05627_2.00
Homo sapiens
NNSAAGKTCAAGKKYRN
NYRMMCTTGAMCTTSNN
SELEX
Yin et al.(2017)
NR6A1_eDBD_HT-SELEX
0.757
0.486
NR6A1
M09284_2.00
Homo sapiens
AAGKTCAAGKTCA
TGAMCTTGAMCTT
Misc
Kulakovskiy et al.(2013)
NR6A1_HUMAN.H11MO.0.B
0.757
0.486
NR6A1
M11148_2.00
Homo sapiens
NKCAAGKTCAAGKTCANN
NNTGAMCTTGAMCTTGMN
Transfac
Matys et al.(2006)
V$GCNF_01
0.757
0.486
NR6A1
M11149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GCNF_Q3
0.757
0.486
NR6A1
M05628_2.00
Homo sapiens
NYSAAGKTCAAGKKCRN
NYGMMCTTGAMCTTSRN
SELEX
Yin et al.(2017)
NR6A1_eDBD_Methyl-HT-SELEX
0.757
0.486
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPAL_0000038800.1
Nuclear receptor
11
80
SNCAVCSDKATGVHYGVLSCNGCKTFFRRSIVKNKNYVCLGVEDCDVSKAGRCSCQFCRLKKCITVGMNK
Links
Other
Nuclear receptor
family TFs
Other
Strongyloides papillosus
TFs
235 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVE_0268000
Strongyloides venezuelensis
SVE_0268000
I
0.992
SSTP_0001081300
Strongyloides stercoralis
SSTP_0001081300
I
0.939
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
0.915
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
0.915
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
0.914
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
0.914
PTRK_0000038300
Parastrongyloides trichosuri
PTRK_0000038300
N
0.905
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
0.898
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
0.890
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
0.881
Bm4980
Brugia malayi
Bm4980
I
0.879
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
0.879
nhr-49
Caenorhabditis elegans
WBGene00003639
D
0.877
CBG03844
Caenorhabditis briggsae
CBG03844
I
0.877
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
0.877
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
0.877
ASU_03870
Ascaris suum
ASU_03870
I
0.877
CBN18198
Caenorhabditis brenneri
CBN18198
I
0.877
LOAG_08615
Loa loa
LOAG_08615
I
0.877
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
0.877
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
0.877
CBN20749
Caenorhabditis brenneri
CBN20749
I
0.877
CRE08259
Caenorhabditis remanei
CRE08259
I
0.877
CRE30787
Caenorhabditis remanei
CRE30787
I
0.866
CBN28528
Caenorhabditis brenneri
CBN28528
I
0.866
CBN15481
Caenorhabditis brenneri
CBN15481
I
0.866
L889_g17247
Steinernema feltiae
L889_g17247
I
0.863
L898_g26357
Steinernema monticolum
L898_g26357
I
0.863
scaffold314-EXSNAP2012.19
Pristionchus exspectatus
scaffold314-EXSNAP2012.19
I
0.859
BXY_0360200
Bursaphelenchus xylophilus
BXY_0360200
I
0.855
SSTP_0000408200
Strongyloides stercoralis
SSTP_0000408200
I
0.855
nhr-47
Caenorhabditis elegans
WBGene00003637
I
0.854
SVE_1749000
Strongyloides venezuelensis
SVE_1749000
I
0.854
SVE_0429000
Strongyloides venezuelensis
SVE_0429000
I
0.852
SPAL_0001637600
Strongyloides papillosus
SPAL_0001637600
I
0.852
SSTP_0000055100
Strongyloides stercoralis
SSTP_0000055100
I
0.852
PTRK_0000994100
Parastrongyloides trichosuri
PTRK_0000994100
I
0.852
SPAL_0000231300
Strongyloides papillosus
SPAL_0000231300
I
0.849
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
0.842
HCOI00618700
Haemonchus contortus
HCOI00618700
I
0.842
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
0.842
PTRK_0000194200
Parastrongyloides trichosuri
PTRK_0000194200
I
0.841
CJA00680
Caenorhabditis japonica
CJA00680
I
0.841
L898_g9866
Steinernema monticolum
L898_g9866
I
0.840
HPBE_0001154501
Heligmosomoides bakeri
HPBE_0001154501
I
0.840
ACOC_0000869501
Angiostrongylus costaricensis
ACOC_0000869501
I
0.840
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
0.840
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
0.839
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
0.839
L893_g13285
Steinernema glaseri
L893_g13285
I
0.839
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
0.839
L889_g1557
Steinernema feltiae
L889_g1557
I
0.839
L596_g11035
Steinernema carpocapsae
L596_g11035
I
0.838
SNAPOd2T00013219001
Oikopleura dioica
SNAPOd2T00013219001
I
0.838
SNAPOd2T00013215001
Oikopleura dioica
SNAPOd2T00013215001
I
0.838
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
0.838
SVE_0146100
Strongyloides venezuelensis
SVE_0146100
I
0.836
SSTP_0001253400
Strongyloides stercoralis
SSTP_0001253400
I
0.836
SPAL_0001712900
Strongyloides papillosus
SPAL_0001712900
I
0.836
PTRK_0000480700
Parastrongyloides trichosuri
PTRK_0000480700
I
0.836
L893_g28857
Steinernema glaseri
L893_g28857
I
0.833
NBR_0001576001
Nippostrongylus brasiliensis
NBR_0001576001
I
0.831
SMUV_0000475001
Syphacia muris
SMUV_0000475001
I
0.829
SNAPOd2T00011859001
Oikopleura dioica
SNAPOd2T00011859001
I
0.828
HCOI00673400
Haemonchus contortus
HCOI00673400
I
0.826
HCOI01687000
Haemonchus contortus
HCOI01687000
I
0.826
PPA21777
Pristionchus pacificus
PPA21777
I
0.823
ASU_10584
Ascaris suum
ASU_10584
I
0.822
L898_g8573
Steinernema monticolum
L898_g8573
I
0.822
L893_g15276
Steinernema glaseri
L893_g15276
I
0.822
L889_g22901
Steinernema feltiae
L889_g22901
I
0.822
L892_g5079
Steinernema scapterisci
L892_g5079
I
0.822
L596_g19151
Steinernema carpocapsae
L596_g19151
I
0.822
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06210-processed-gene-0.0
I
0.817
NECAME_08394
Necator americanus
NECAME_08394
I
0.816
scaffold826-EXSNAP2012.10
Pristionchus exspectatus
scaffold826-EXSNAP2012.10
I
0.815
scaffold251-EXSNAP2012.44
Pristionchus exspectatus
scaffold251-EXSNAP2012.44
I
0.815
scaffold43-EXSNAP2012.41
Pristionchus exspectatus
scaffold43-EXSNAP2012.41
I
0.815
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15936-processed-gene-0.0
I
0.814
MhA1_Contig320.frz3.gene45
Meloidogyne hapla
MhA1_Contig320.frz3.gene45
I
0.814
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf15282-processed-gene-0.0
I
0.814
CBG09380
Caenorhabditis briggsae
CBG09380
I
0.811
RSKR_0001171300
Rhabditophanes kr3021
RSKR_0001171300
I
0.811
NEMVEDRAFT_v1g134436
Nematostella vectensis
NEMVEDRAFT_v1g134436
I
0.808
DICVIV_03784
Dictyocaulus viviparus
DICVIV_03784
I
0.808
HCOI01292200
Haemonchus contortus
HCOI01292200
I
0.805
ASIM_0001308601
Anisakis simplex
ASIM_0001308601
I
0.805
HPLM_0000769401
Haemonchus placei
HPLM_0000769401
I
0.803
EVEC_0001313601
Enterobius vermicularis
EVEC_0001313601
I
0.801
PPA06637
Pristionchus pacificus
PPA06637
I
0.800
BXY_0599800
Bursaphelenchus xylophilus
BXY_0599800
I
0.800
HmN_000254900
Hymenolepis microstoma
HmN_000254900
I
0.800
EmuJ_000088800
Echinococcus multilocularis
EmuJ_000088800
I
0.800
TTAC_0000076101
Hydatigera taeniaeformis
TTAC_0000076101
I
0.800
ECANG7_07248
Echinococcus canadensis
ECANG7_07248
I
0.800
TsM_000004500
Taenia solium
TsM_000004500
I
0.800
GPLIN_000337500
Globodera pallida
GPLIN_000337500
I
0.799
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf24822-processed-gene-0.0
I
0.798
scaffold598-EXSNAP2012.5
Pristionchus exspectatus
scaffold598-EXSNAP2012.5
I
0.797
ACAC_0001297301
Angiostrongylus cantonensis
ACAC_0001297301
I
0.796
CRE00606
Caenorhabditis remanei
CRE00606
I
0.794
nhr-173
Caenorhabditis elegans
WBGene00016975
I
0.794
CBG10857
Caenorhabditis briggsae
CBG10857
I
0.794
ENSCSAVG00000002688
Ciona savignyi
ENSCSAVG00000002688
I
0.792
gcnf
Ciona intestinalis
ENSCING00000005163
I
0.792
SVE_1723700
Strongyloides venezuelensis
SVE_1723700
I
0.791
SPAL_0001408100
Strongyloides papillosus
SPAL_0001408100
I
0.791
Ppa-unc-55
Pristionchus pacificus
PPA04999
I
0.790
SSTP_0000766500
Strongyloides stercoralis
SSTP_0000766500
I
0.787
PTRK_0000971200
Parastrongyloides trichosuri
PTRK_0000971200
I
0.787
DICVIV_09685
Dictyocaulus viviparus
DICVIV_09685
I
0.785
HPLM_0000431601
Haemonchus placei
HPLM_0000431601
I
0.785
HCOI01788400
Haemonchus contortus
HCOI01788400
I
0.785
ANCCAN_06314
Ancylostoma caninum
ANCCAN_06314
I
0.785
ANCCEY_08759
Ancylostoma ceylanicum
ANCCEY_08759
I
0.785
ACAC_0000851101
Angiostrongylus cantonensis
ACAC_0000851101
I
0.785
NBR_0001334401
Nippostrongylus brasiliensis
NBR_0001334401
I
0.785
NBR_0001642901
Nippostrongylus brasiliensis
NBR_0001642901
I
0.785
NECAME_09496
Necator americanus
NECAME_09496
I
0.785
TELCIR_00680
Teladorsagia circumcincta
TELCIR_00680
I
0.785
nhr-120
Caenorhabditis elegans
WBGene00003710
I
0.784
CBG10855
Caenorhabditis briggsae
CBG10855
I
0.784
CJA08896
Caenorhabditis japonica
CJA08896
I
0.784
CRE00149
Caenorhabditis remanei
CRE00149
I
0.783
L889_g1891
Steinernema feltiae
L889_g1891
I
0.782
L892_g4169
Steinernema scapterisci
L892_g4169
I
0.781
L596_g27472
Steinernema carpocapsae
L596_g27472
I
0.781
ASIM_0001569801
Anisakis simplex
ASIM_0001569801
I
0.779
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.775
L889_g28055
Steinernema feltiae
L889_g28055
I
0.773
nLs.2.1.2.g07992
Litomosoides sigmodontis
nLs.2.1.2.g07992
I
0.773
L893_g33993
Steinernema glaseri
L893_g33993
I
0.773
L892_g17164
Steinernema scapterisci
L892_g17164
I
0.773
OFLC_0000536201
Onchocerca flexuosa
OFLC_0000536201
I
0.773
L596_g23334
Steinernema carpocapsae
L596_g23334
I
0.773
L898_g4691
Steinernema monticolum
L898_g4691
I
0.773
nAv.1.0.1.g03443
Acanthocheilonema viteae
nAv.1.0.1.g03443
I
0.773
DME_0000359001
Dracunculus medinensis
DME_0000359001
I
0.773
Bm4429
Brugia malayi
Bm4429
I
0.773
TCLT_0000045701
Thelazia callipaeda
TCLT_0000045701
I
0.773
BTMF_0001121901
Brugia timori
BTMF_0001121901
I
0.773
LOAG_00337
Loa loa
LOAG_00337
I
0.773
nOo.2.0.1.g08426
Onchocerca ochengi
nOo.2.0.1.g08426
I
0.773
WBGene00237444
Onchocerca volvulus
WBGene00237444
I
0.773
TCNE_0001579701
Toxocara canis
TCNE_0001579701
I
0.773
PTRK_0000497700
Parastrongyloides trichosuri
PTRK_0000497700
I
0.771
SSTP_0001234800
Strongyloides stercoralis
SSTP_0001234800
I
0.771
SPAL_0000110400
Strongyloides papillosus
SPAL_0000110400
I
0.771
SVE_0137400
Strongyloides venezuelensis
SVE_0137400
I
0.771
CBN24827
Caenorhabditis brenneri
CBN24827
I
0.768
L893_g3565
Steinernema glaseri
L893_g3565
I
0.766
GPLIN_001122300
Globodera pallida
GPLIN_001122300
I
0.765
RSKR_0000342500
Rhabditophanes kr3021
RSKR_0000342500
I
0.764
Sakowv30002150m.g
Saccoglossus kowalevskii
Sakowv30002150m.g
I
0.763
BXY_0810300
Bursaphelenchus xylophilus
BXY_0810300
I
0.763
SMAR013556
Strigamia maritima
SMAR013556
I
0.762
EVEC_0000027301
Enterobius vermicularis
EVEC_0000027301
I
0.761
L892_g17612
Steinernema scapterisci
L892_g17612
I
0.760
PEQ_0000722401
Parascaris equorum
PEQ_0000722401
I
0.760
ASU_03657
Ascaris suum
ASU_03657
I
0.760
ENSLOCG00000005138
Lepisosteus oculatus
ENSLOCG00000005138
I
0.757
ENSGMOG00000008794
Gadus morhua
ENSGMOG00000008794
I
0.757
NR6A1
Loxodonta africana
ENSLAFG00000011676
I
0.757
NR6A1
Gorilla gorilla
ENSGGOG00000009250
I
0.757
ENSLACG00000018630
Latimeria chalumnae
ENSLACG00000018630
I
0.757
NR6A1
Anolis carolinensis
ENSACAG00000006870
I
0.757
NR6A1
Cavia porcellus
ENSCPOG00000005970
I
0.757
NR6A1
Callithrix jacchus
ENSCJAG00000006631
I
0.757
NR6A1
Echinops telfairi
ENSETEG00000012014
I
0.757
NR6A1
Equus caballus
ENSECAG00000021324
I
0.757
nr6a1a
Danio rerio
ENSDARG00000101508
I
0.757
NR6A1
Dasypus novemcinctus
ENSDNOG00000017832
I
0.757
ENSFALG00000002133
Ficedula albicollis
ENSFALG00000002133
I
0.757
NR6A1
Felis catus
ENSFCAG00000005507
I
0.757
ENSAMEG00000011212
Ailuropoda melanoleuca
ENSAMEG00000011212
I
0.757
nr6a1a
Gasterosteus aculeatus
ENSGACG00000003560
I
0.757
ENSAPLG00000004548
Anas platyrhynchos
ENSAPLG00000004548
I
0.757
NR6A1
Homo sapiens
ENSG00000148200
D
0.757
NR6A1
Canis familiaris
ENSCAFG00000020216
I
0.757
NR6A1
Bos taurus
ENSBTAG00000040585
I
0.757
NR6A1
Gallus gallus
ENSGALG00000001073
I
0.757
NR6A1
Otolemur garnettii
ENSOGAG00000030677
I
0.757
nr6a1a
Tetraodon nigroviridis
ENSTNIG00000010587
I
0.757
nr6a1a
Takifugu rubripes
ENSTRUG00000006306
I
0.757
ENSTSYG00000004262
Tarsius syrichta
ENSTSYG00000004262
I
0.757
NR6A1
Tursiops truncatus
ENSTTRG00000017391
I
0.757
NR5A1
Taeniopygia guttata
ENSTGUG00000007170
I
0.757
ENSMEUG00000013509
Macropus eugenii
ENSMEUG00000013509
I
0.757
ENSSHAG00000016733
Sarcophilus harrisii
ENSSHAG00000016733
I
0.757
ENSSSCG00000023876
Sus scrofa
ENSSSCG00000023876
I
0.757
ENSSTOG00000022764
Ictidomys tridecemlineatus
ENSSTOG00000022764
I
0.757
ENSXMAG00000009061
Xiphophorus maculatus
ENSXMAG00000009061
I
0.757
nr6a1
Xenopus tropicalis
XB-GENE-487592
I
0.757
ENSBTAP00000051129-D1
Bos grunniens
ENSBTAP00000051129-D1
I
0.757
Cmyd_10020219
Chelonia mydas
Cmyd_10020219
I
0.757
Afo_R013752
Aptenodytes forsteri
Afo_R013752
I
0.757
Aan_R009393
Calypte anna
Aan_R009393
I
0.757
ENSP00000420267
Macaca fascicularis
ENSP00000420267
I
0.757
Gfo_R007909
Geospiza fortis
Gfo_R007909
I
0.757
Ocbimv22020378m.g
Octopus bimaculoides
Ocbimv22020378m.g
I
0.757
Pvit_08519
Pogona vitticeps
Pvit_08519
I
0.757
Myotis_brandtii_NR6A1_10025096
Myotis brandtii
Myotis_brandtii_NR6A1_10025096
I
0.757
Nr6a1
Rattus norvegicus
ENSRNOG00000013232
I
0.757
NR6A1
Tupaia belangeri
ENSTBEG00000007008
I
0.757
Nr6a1
Mus musculus
ENSMUSG00000063972
I
0.757
ENSNLEG00000017287
Nomascus leucogenys
ENSNLEG00000017287
I
0.757
ENSOARG00000013368
Ovis aries
ENSOARG00000013368
I
0.757
SPU_000749
Strongylocentrotus purpuratus
SPU_000749
I
0.757
ENSMPUG00000013965
Mustela putorius furo
ENSMPUG00000013965
I
0.757
NR6A1
Monodelphis domestica
ENSMODG00000019748
I
0.757
NR5A1
Meleagris gallopavo
ENSMGAG00000008342
I
0.757
NR6A1
Microcebus murinus
ENSMICG00000002911
I
0.757
NR6A1
Myotis lucifugus
ENSMLUG00000014714
I
0.757
NR6A1
Macaca mulatta
ENSMMUG00000011185
I
0.757
ENSONIG00000020217
Oreochromis niloticus
ENSONIG00000020217
I
0.757
NR6A1
Oryctolagus cuniculus
ENSOCUG00000007599
I
0.757
ENSPPYG00000019600
Pongo abelii
ENSPPYG00000019600
I
0.757
ENSPSIG00000006445
Pelodiscus sinensis
ENSPSIG00000006445
I
0.757
ENSORLG00000016492
Oryzias latipes
ENSORLG00000016492
I
0.757
NR6A1
Ochotona princeps
ENSOPRG00000016686
I
0.757
NR6A1
Pan troglodytes
ENSPTRG00000021357
I
0.757
ENSPFOG00000005783
Poecilia formosa
ENSPFOG00000005783
I
0.757
ENSPANG00000025861
Papio anubis
ENSPANG00000025861
I
0.757
ASU_08381
Ascaris suum
ASU_08381
I
0.756
ALUE_0000465801
Ascaris lumbricoides
ALUE_0000465801
I
0.756
nDi.2.2.2.g01326
Dirofilaria immitis
nDi.2.2.2.g01326
I
0.754
SMU15037562
Schmidtea mediterranea
SMU15037562
I
0.754
SSTP_0000546600
Strongyloides stercoralis
SSTP_0000546600
I
0.753
Smp_174700
Schistosoma mansoni
Smp_174700
I
0.752
B_00901
Schistosoma haematobium
B_00901
I
0.752
XP_002159483.1
Hydra magnipapillata
XP_002159483.1
I
0.752
SROB_0001376101
Schistosoma rodhaini
SROB_0001376101
I
0.752
TCNE_0001076801
Toxocara canis
TCNE_0001076801
N
0.750
CJA37776
Caenorhabditis japonica
CJA37776
I
0.748
Hba_20244
Heterorhabditis bacteriophora
Hba_20244
I
0.746