SPAL_0000150000 (Strongyloides papillosus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SPAL_0000150000 T310475_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hr96
M03940_2.00
Drosophila melanogaster
YVRGTRCANVTGYACYBR

YVRGTRCABNTGYACYBR
SELEX
Nitta et al.(2015)
Hr96_1
0.852 0.671
daf-12
M00685_2.00
Caenorhabditis elegans
NDAGTRCANN

NNTGYACTHN
PBM
Narasimhan et al.(2015)
pTH9108
0.828 0.757
daf-12
M08159_2.00
Caenorhabditis elegans
GWGYGYGYKTGYDKB

VMHRCAMRCRCRCWC
ChIP-seq
Mathelier et al.(2014)
MA0538.1
0.828 0.757
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SPAL_0000150000.1 Nuclear receptor 46 115

Links

Other Nuclear receptor family TFs
Other Strongyloides papillosus TFs

117 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29908.m006159 Ricinus communis 29908.m006159 N 0.000
cassava44367.m1 Manihot esculenta cassava44367.m1 N 0.000
Ca_23494 Cicer arietinum Ca_23494 N 0.000
Ca_26279 Cicer arietinum Ca_26279 N 0.000
Ciclev10000940m.g Citrus clementina Ciclev10000940m.g N 0.000
Eucgr.L03490 Eucalyptus grandis Eucgr.L03490 N 0.000
evm.TU.supercontig_36.32 Carica papaya evm.TU.supercontig_36.32 N 0.000
gene11137-v1.0-hybrid Fragaria vesca gene11137-v1.0-hybrid N 0.000
GLYMA04G43090 Glycine max GLYMA04G43090 N 0.000
GLYMA06G11610 Glycine max GLYMA06G11610 N 0.000
Gorai.010G048800 Gossypium raimondii Gorai.010G048800 N 0.000
LjT15C06.70.nc Lotus japonicus LjT15C06.70.nc N 0.000
MTR_3g072710 Medicago truncatula MTR_3g072710 N 0.000
orange1.1g011012m.g Citrus sinensis orange1.1g011012m.g N 0.000
PGSC0003DMG400012071 Solanum tuberosum PGSC0003DMG400012071 N 0.000
Pm004863 Prunus mume Pm004863 N 0.000
POPTR_0005s15900 Populus trichocarpa POPTR_0005s15900 N 0.000
TCM_035069 Theobroma cacao TCM_035069 N 0.000
VIT_18s0001g03310 Vitis vinifera VIT_18s0001g03310 N 0.000