SVE_0532500 (Strongyloides venezuelensis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVE_0532500 T310645_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
eg
M03927_2.00
Drosophila melanogaster
NAAAYTRGAKCA

TGMTCYARTTTN
SELEX
Nitta et al.(2015)
eg_1
0.807 0.600
eg
M06415_2.00
Drosophila melanogaster
RAAANTAGRGCAV

BTGCYCTANTTTY
B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560
0.807 0.600
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVE_0532500.1 Nuclear receptor 26 116

Links

Other Nuclear receptor family TFs
Other Strongyloides venezuelensis TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP12797 Atta cephalotes ACEP12797 I 0.768
ACYPI066036 Acyrthosiphon pisum ACYPI066036 I 0.804
ACYPI48166 Acyrthosiphon pisum ACYPI48166 I 0.804
ACYPI56791 Acyrthosiphon pisum ACYPI56791 I 0.804
AGAP028221 Anopheles gambiae AGAP028221 I 0.784
A_05482 Schistosoma haematobium A_05482 I 0.763
Cflo_03603--XP_001120531.1_APIME Camponotus floridanus Cflo_03603--XP_001120531.1_APIME I 0.768
CLEC007515 Cimex lectularius CLEC007515 I 0.804
CLEC025065 Cimex lectularius CLEC025065 I 0.805
DAPPUDRAFT_290673 Daphnia pulex DAPPUDRAFT_290673 I 0.760
eg Drosophila melanogaster FBgn0000560 D 0.807
GA20312 Drosophila pseudoobscura FBgn0080307 I 0.807
GF25170 Drosophila ananassae FBgn0102162 I 0.807
GG16225 Drosophila erecta FBgn0108460 I 0.807
GH16373 Drosophila grimshawi FBgn0123844 I 0.807
GI11566 Drosophila mojavensis FBgn0134326 I 0.807
GL24862 Drosophila persimilis FBgn0162450 I 0.807
GD15001 Drosophila simulans FBgn0186673 I 0.807
GJ11245 Drosophila virilis FBgn0198506 I 0.794
GK17344 Drosophila willistoni FBgn0219343 I 0.807
GE19793 Drosophila yakuba FBgn0237126 I 0.807
GE23274 Drosophila yakuba FBgn0240471 I 0.807
GB51231 Apis mellifera GB51231 I 0.768
Hsal_02936--XP_001120531.1_APIME Harpegnathos saltator Hsal_02936--XP_001120531.1_APIME I 0.768
KGM_21348 Danaus plexippus KGM_21348 I 0.784
L596_g11004 Steinernema carpocapsae L596_g11004 N 0.799
L798_11128 Zootermopsis nevadensis L798_11128 I 0.804
L889_g26612 Steinernema feltiae L889_g26612 N 0.782
LCUP004919 Lucilia cuprina LCUP004919 I 0.783
MDOA002495 Musca domestica MDOA002495 I 0.783
NV16468 Nasonia vitripennis NV16468 I 0.768
PHUM468660 Pediculus humanus PHUM468660 I 0.777
RPRC003216 Rhodnius prolixus RPRC003216 I 0.804
SINV19432 Solenopsis invicta SINV19432 I 0.768
SMAR012614 Strigamia maritima SMAR012614 I 0.770
SMTD_0001266401 Schistosoma mattheei SMTD_0001266401 I 0.763
TC003409 Tribolium castaneum TC003409 I 0.784
tetur34g00430 Tetranychus urticae tetur34g00430 I 0.764
TRE_0000379501 Trichobilharzia regenti TRE_0000379501 I 0.763