CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVUK_0000955601
(
Strongylus vulgaris
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SVUK_0000955601
T310697_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-1
M00686_2.00
Caenorhabditis elegans
ARTGATCA
TGATCAYT
PBM
Narasimhan et al.(2015)
pTH9322
0.364
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVUK_0000955601-mRNA-1
Nuclear receptor
49
70
ELCAVCSDLATGYHYGVASCNG
Links
Other
Nuclear receptor
family TFs
Other
Strongylus vulgaris
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NBR_0000762301
Nippostrongylus brasiliensis
NBR_0000762301
N
0.364
L893_g3010
Steinernema glaseri
L893_g3010
I
0.364
L889_g29879
Steinernema feltiae
L889_g29879
I
0.364
L596_g12321
Steinernema carpocapsae
L596_g12321
I
0.364
nDi.2.2.2.g02318
Dirofilaria immitis
nDi.2.2.2.g02318
I
0.364
nOo.2.0.1.g01530
Onchocerca ochengi
nOo.2.0.1.g01530
I
0.364
TELCIR_05987
Teladorsagia circumcincta
TELCIR_05987
I
0.364
TCNE_0001309701
Toxocara canis
TCNE_0001309701
I
0.364
TCLT_0000399401
Thelazia callipaeda
TCLT_0000399401
I
0.364
OFLC_0001450101
Onchocerca flexuosa
OFLC_0001450101
I
0.364
HPBE_0000837301
Heligmosomoides bakeri
HPBE_0000837301
I
0.364
HCOI01554200
Haemonchus contortus
HCOI01554200
I
0.364
ANCCAN_02777
Ancylostoma caninum
ANCCAN_02777
N
0.364
ACOC_0000700901
Angiostrongylus costaricensis
ACOC_0000700901
I
0.364
WBGene00241993
Onchocerca volvulus
WBGene00241993
I
0.364
LOAG_00300
Loa loa
LOAG_00300
I
0.364
ANCCEY_01961
Ancylostoma ceylanicum
ANCCEY_01961
I
0.364
ANCDUO_02054
Ancylostoma duodenale
ANCDUO_02054
N
0.364
DME_0000693601
Dracunculus medinensis
DME_0000693601
I
0.364
DICVIV_09815
Dictyocaulus viviparus
DICVIV_09815
I
0.364
BTMF_0001388101
Brugia timori
BTMF_0001388101
I
0.364
ASIM_0001358301
Anisakis simplex
ASIM_0001358301
N
0.364
Bm5319
Brugia malayi
Bm5319
I
0.364