SVUK_0001012101 (Strongylus vulgaris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVUK_0001012101 T310699_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-3
M00687_2.00 		Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN		 PBM
Narasimhan et al.(2015)
pTH9163 		0.931 0.790
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001012101-mRNA-1 Nuclear receptor 36 98

Links

Other Nuclear receptor family TFs
Other Strongylus vulgaris TFs

39 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OESDEN_02943 Oesophagostomum dentatum OESDEN_02943 I 0.935
HCOI02077900 Haemonchus contortus HCOI02077900 I 0.935
NECAME_04545 Necator americanus NECAME_04545 I 0.935
TELCIR_01879 Teladorsagia circumcincta TELCIR_01879 I 0.935
ANCCAN_18459 Ancylostoma caninum ANCCAN_18459 I 0.935
WUBG_08518 Wuchereria bancrofti WUBG_08518 I 0.932
TCNE_0001780601 Toxocara canis TCNE_0001780601 I 0.932
ASU_10946 Ascaris suum ASU_10946 I 0.932
nOo.2.0.1.g05901 Onchocerca ochengi nOo.2.0.1.g05901 I 0.932
nLs.2.1.2.g05858 Litomosoides sigmodontis nLs.2.1.2.g05858 I 0.932
nAv.1.0.1.g09896 Acanthocheilonema viteae nAv.1.0.1.g09896 I 0.932
Bm14724 Brugia malayi Bm14724 I 0.932
OFLC_0000776201 Onchocerca flexuosa OFLC_0000776201 I 0.932
BTMF_0000273701 Brugia timori BTMF_0000273701 I 0.932
nDi.2.2.2.g05078 Dirofilaria immitis nDi.2.2.2.g05078 I 0.932
LOAG_18352 Loa loa LOAG_18352 I 0.932
TCLT_0000079701 Thelazia callipaeda TCLT_0000079701 I 0.932
WBGene00241910 Onchocerca volvulus WBGene00241910 I 0.932
nhr-3 Caenorhabditis elegans WBGene00003602 D 0.931
CRE15289 Caenorhabditis remanei CRE15289 I 0.931
CBG07552 Caenorhabditis briggsae CBG07552 I 0.931
CBN19233 Caenorhabditis brenneri CBN19233 I 0.930
CJA13646 Caenorhabditis japonica CJA13646 I 0.928
L893_g29555 Steinernema glaseri L893_g29555 I 0.925
PPA20304 Pristionchus pacificus PPA20304 I 0.923
L596_g25666 Steinernema carpocapsae L596_g25666 I 0.922
L892_g650 Steinernema scapterisci L892_g650 I 0.922
SMUV_0000428701 Syphacia muris SMUV_0000428701 I 0.919
DICVIV_11945 Dictyocaulus viviparus DICVIV_11945 I 0.917
ASIM_0001589901 Anisakis simplex ASIM_0001589901 I 0.909
BXY_0011200 Bursaphelenchus xylophilus BXY_0011200 I 0.887
snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 Meloidogyne floridensis snap_masked-nMf.1.1.scaf18837-processed-gene-0.2 I 0.885
Minc01725 Meloidogyne incognita Minc01725 I 0.885
Minc13525 Meloidogyne incognita Minc13525 I 0.885
maker-nMf.1.1.scaf07948-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf07948-snap-gene-0.4 I 0.885
MhA1_Contig217.frz3.gene7 Meloidogyne hapla MhA1_Contig217.frz3.gene7 I 0.885
GPLIN_000669000 Globodera pallida GPLIN_000669000 I 0.881
DME_0000480501 Dracunculus medinensis DME_0000480501 I 0.851
ACOC_0000732601 Angiostrongylus costaricensis ACOC_0000732601 I 0.836