SVUK_0001603001 (Strongylus vulgaris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVUK_0001603001 T310709_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.930 0.571
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR

YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.860 0.629
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001603001-mRNA-1 Nuclear receptor 31 101

Links

Other Nuclear receptor family TFs
Other Strongylus vulgaris TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.989
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.987
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.987
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.987
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.985
ACOC_0000492601 Angiostrongylus costaricensis ACOC_0000492601 I 0.973
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.952
CRE30948 Caenorhabditis remanei CRE30948 I 0.935
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.930
CBG09567 Caenorhabditis briggsae CBG09567 I 0.927
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.926
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.926
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.924
CBG22870 Caenorhabditis briggsae CBG22870 I 0.918
nhr-213 Caenorhabditis elegans WBGene00011520 I 0.915
CBG06599 Caenorhabditis briggsae CBG06599 I 0.903
CBG06609 Caenorhabditis briggsae CBG06609 I 0.903
L892_g2782 Steinernema scapterisci L892_g2782 I 0.900
CRE08691 Caenorhabditis remanei CRE08691 I 0.899
CJA09697 Caenorhabditis japonica CJA09697 I 0.895
CBG06601 Caenorhabditis briggsae CBG06601 I 0.893
CBG06611 Caenorhabditis briggsae CBG06611 I 0.893
nhr-178 Caenorhabditis elegans WBGene00017510 I 0.891
CRE18430 Caenorhabditis remanei CRE18430 I 0.891
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.886
nhr-102 Caenorhabditis elegans WBGene00003692 I 0.878
NBR_0001834701 Nippostrongylus brasiliensis NBR_0001834701 I 0.876
L893_g18997 Steinernema glaseri L893_g18997 I 0.869
CBN21486 Caenorhabditis brenneri CBN21486 I 0.866
CBG09320 Caenorhabditis briggsae CBG09320 I 0.866
CRE31070 Caenorhabditis remanei CRE31070 I 0.866
CBN28290 Caenorhabditis brenneri CBN28290 I 0.866
CBN23838 Caenorhabditis brenneri CBN23838 I 0.862
CRE15644 Caenorhabditis remanei CRE15644 I 0.862
CJA28065 Caenorhabditis japonica CJA28065 I 0.861
nhr-142 Caenorhabditis elegans WBGene00018430 D 0.860
CBG20729 Caenorhabditis briggsae CBG20729 I 0.860
CRE08749 Caenorhabditis remanei CRE08749 I 0.826
HPBE_0001646201 Heligmosomoides bakeri HPBE_0001646201 I 0.823
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.821
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.816
L596_g14586 Steinernema carpocapsae L596_g14586 I 0.812
CRE15675 Caenorhabditis remanei CRE15675 I 0.807
L898_g19019 Steinernema monticolum L898_g19019 I 0.805
CBG15881 Caenorhabditis briggsae CBG15881 I 0.799
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.795
L889_g6798 Steinernema feltiae L889_g6798 I 0.792
nhr-54 Caenorhabditis elegans WBGene00003644 I 0.792
CBG20727 Caenorhabditis briggsae CBG20727 I 0.787
Minc14668 Meloidogyne incognita Minc14668 I 0.784
L898_g3514 Steinernema monticolum L898_g3514 I 0.779
MhA1_Contig1192.frz3.gene3 Meloidogyne hapla MhA1_Contig1192.frz3.gene3 I 0.775
L898_g3512 Steinernema monticolum L898_g3512 I 0.775
L898_g12798 Steinernema monticolum L898_g12798 I 0.774
L889_g6797 Steinernema feltiae L889_g6797 I 0.773
L889_g6799 Steinernema feltiae L889_g6799 I 0.769
HPLM_0000974401 Haemonchus placei HPLM_0000974401 I 0.764
L889_g6695 Steinernema feltiae L889_g6695 I 0.763
CBG16982 Caenorhabditis briggsae CBG16982 I 0.760
L889_g6692 Steinernema feltiae L889_g6692 I 0.754
CRE05044 Caenorhabditis remanei CRE05044 I 0.750
CBG06387 Caenorhabditis briggsae CBG06387 I 0.749
L889_g6696 Steinernema feltiae L889_g6696 I 0.747
augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf21762-processed-gene-0.0 I 0.747
GPLIN_000282900 Globodera pallida GPLIN_000282900 I 0.746