SVUK_0002058501 (Strongylus vulgaris)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 SVUK_0002058501 T310714_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
nhr-232
M00700_2.00
Caenorhabditis elegans
NNTNTDWYN

NRWHANANN
PBM
Narasimhan et al.(2015)
pTH10647
0.955 0.571
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR

YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.909 0.686
nhr-84
M02414_2.00
Caenorhabditis elegans
NRGTCACAAN

NTTGTGACYN
PBM
Weirauch et al.(2014)
pTH5828
0.773 0.571
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0002058501-mRNA-1 Nuclear receptor 12 96

Links

Other Nuclear receptor family TFs
Other Strongylus vulgaris TFs

Invalid Input OrderBy

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action