ENSAMXG00000013958 (Astyanax mexicanus)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSAMXG00000013958 T310992_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG

CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.903 0.903
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH

DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.903 0.903
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG

CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.903 0.903
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH

DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.903 0.903
TP73
M11196_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.903 0.903
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH

DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.893 0.893
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH

DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.893 0.893
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN

NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000014358 p53 121 317

Links

Other p53 family TFs
Other Astyanax mexicanus TFs

Invalid Input OrderBy

120 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action