ENSPMAG00000009535 (Petromyzon marinus)
p53

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00870 (P53) IPR011615 ENSPMAG00000009535 T311127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Trp63
M09338_2.00
Mus musculus
DRCAWGYHCHRRCHTGYHN

NDRCADGYYDGDRCWTGYH
Misc
Kulakovskiy et al.(2013)
P63_MOUSE.H11MO.0.B
0.745 0.745
Trp73
M03438_2.00
Mus musculus
DRCAWGTYNNRACAYGYH

DRCRTGTYNNRACWTGYH
SELEX
Jolma et al.(2013)
Tp73_1
0.719 0.719
Trp73
M09339_2.00
Mus musculus
NDDCHWGYYCMRRCHTGYH

DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_MOUSE.H11MO.0.B
0.719 0.719
TP73
M08035_2.00
Homo sapiens
RCADGYHSDGRCWDG

CHWGYCHSDRCHTGY
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_rapamycin
0.714 0.714
TP73
M08036_2.00
Homo sapiens
DRRCAWGYHCWGRCWTGYH

DRCAWGYCWGDRCWTGYYH
ChIP-seq
Chen et al.(2011)
GSE15704_TP73_vehicle
0.714 0.714
TP73
M08037_2.00
Homo sapiens
RCMDGYBCHNDCHKG

CMDGHNDGVRCHKGY
ChIP-seq
Chen et al.(2011)
GSE18650_TP73
0.714 0.714
TP73
M09336_2.00
Homo sapiens
NDDCHWGYYCMRRCHTGYH

DRCADGYYKGRRCWDGHHN
Misc
Kulakovskiy et al.(2013)
P73_HUMAN.H11MO.0.A
0.714 0.714
TP73
M11196_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$P73_Q6
0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000010479 p53 30 227

Links

Other p53 family TFs
Other Petromyzon marinus TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OS10G0376900 Oryza sativa OS10G0376900 N 0.000
TCM_005028 Theobroma cacao TCM_005028 N 0.000
VIT_15s0048g02510 Vitis vinifera VIT_15s0048g02510 N 0.000
Ca_22410 Cicer arietinum Ca_22410 N 0.000
Pm028748 Prunus mume Pm028748 N 0.000
30076.m004456 Ricinus communis 30076.m004456 N 0.000
cassava29786.valid.m1 Manihot esculenta cassava29786.valid.m1 N 0.000
cassava34492.m1 Manihot esculenta cassava34492.m1 N 0.000
cassava39415.m1 Manihot esculenta cassava39415.m1 N 0.000
mgf017530m Mimulus guttatus mgf017530m N 0.000
Bostr.13158s0200 Boechera stricta Bostr.13158s0200 N 0.000
Bostr.25993s0085 Boechera stricta Bostr.25993s0085 N 0.000
Cagra.0483s0048 Capsella grandiflora Cagra.0483s0048 N 0.000
TCM_001031 Theobroma cacao TCM_001031 N 0.000
Solyc11g010340.1 Solanum lycopersicum Solyc11g010340.1 N 0.000
Si040271m.g Setaria italica Si040271m.g N 0.000
PGSC0003DMG400016145 Solanum tuberosum PGSC0003DMG400016145 N 0.000
POPTR_0002s18100 Populus trichocarpa POPTR_0002s18100 N 0.000
POPTR_0014s10190 Populus trichocarpa POPTR_0014s10190 N 0.000
PRUPE_ppa006041mg Prunus persica PRUPE_ppa006041mg N 0.000
Sb0012s004780 Sorghum bicolor Sb0012s004780 N 0.000
Sb01g044640 Sorghum bicolor Sb01g044640 N 0.000
Sb01g049080 Sorghum bicolor Sb01g049080 N 0.000
Sb04g027280 Sorghum bicolor Sb04g027280 N 0.000
scaffold_403653.1 Arabidopsis lyrata scaffold_403653.1 N 0.000
Si017701m.g Setaria italica Si017701m.g N 0.000
Si036568m.g Setaria italica Si036568m.g N 0.000
Si038653m.g Setaria italica Si038653m.g N 0.000
Carubv10018614m.g Capsella rubella Carubv10018614m.g N 0.000
Ciclev10020360m.g Citrus clementina Ciclev10020360m.g N 0.000
Eucgr.H02788 Eucalyptus grandis Eucgr.H02788 N 0.000
Pavir.Aa00538 Panicum virgatum Pavir.Aa00538 N 0.000
Pavir.Db01842 Panicum virgatum Pavir.Db01842 N 0.000
Pavir.Ia02758 Panicum virgatum Pavir.Ia02758 N 0.000
Pavir.Ia03109 Panicum virgatum Pavir.Ia03109 N 0.000
Pavir.Ia04907 Panicum virgatum Pavir.Ia04907 N 0.000
Pavir.Ib02778 Panicum virgatum Pavir.Ib02778 N 0.000
Pavir.J40759 Panicum virgatum Pavir.J40759 N 0.000
SapurV1A.0003s0430 Salix purpurea SapurV1A.0003s0430 N 0.000
SapurV1A.0151s0200 Salix purpurea SapurV1A.0151s0200 N 0.000
SapurV1A.0162s0340 Salix purpurea SapurV1A.0162s0340 N 0.000
Thhalv10006045m.g Eutrema salsugineum Thhalv10006045m.g N 0.000
PK21055.1 Cannabis sativa PK21055.1 N 0.000
orange1.1g013752m.g Citrus sinensis orange1.1g013752m.g N 0.000
MDP0000829998 Malus domestica MDP0000829998 N 0.000
MDP0000321049 Malus domestica MDP0000321049 N 0.000
Eucgr.H04738 Eucalyptus grandis Eucgr.H04738 N 0.000
evm.TU.supercontig_57.85 Carica papaya evm.TU.supercontig_57.85 N 0.000
gene16221-v1.0-hybrid Fragaria vesca gene16221-v1.0-hybrid N 0.000
gene18608-v1.0-hybrid Fragaria vesca gene18608-v1.0-hybrid N 0.000
gene18888-v1.0-hybrid Fragaria vesca gene18888-v1.0-hybrid N 0.000
Gorai.003G041800 Gossypium raimondii Gorai.003G041800 N 0.000
Gorai.007G113200 Gossypium raimondii Gorai.007G113200 N 0.000
Gorai.007G113300 Gossypium raimondii Gorai.007G113300 N 0.000
Lus10001271.g Linum usitatissimum Lus10001271.g N 0.000
Lus10009475.g Linum usitatissimum Lus10009475.g N 0.000
Lus10010101.g Linum usitatissimum Lus10010101.g N 0.000
Lus10012603.g Linum usitatissimum Lus10012603.g N 0.000
chr3.CM0208.290.nc Lotus japonicus chr3.CM0208.290.nc N 0.000
OS03G0122100 Oryza sativa OS03G0122100 N 0.000
AC233899.1_FG002 Zea mays AC233899.1_FG002 N 0.000
fgenesh2_kg.5__2692__AT3G61950.1 Arabidopsis lyrata fgenesh2_kg.5__2692__AT3G61950.1 N 0.000
GLYMA07G05500 Glycine max GLYMA07G05500 N 0.000
GLYMA16G02020 Glycine max GLYMA16G02020 N 0.000
GRMZM2G008691 Zea mays GRMZM2G008691 N 0.000
GRMZM2G045883 Zea mays GRMZM2G045883 N 0.000
GRMZM2G475289 Zea mays GRMZM2G475289 N 0.000
GSMUA_Achr11G02740_001 Musa acuminata GSMUA_Achr11G02740_001 N 0.000
GSMUA_Achr11G21440_001 Musa acuminata GSMUA_Achr11G21440_001 N 0.000
GSMUA_Achr8G12330_001 Musa acuminata GSMUA_Achr8G12330_001 N 0.000
GSMUA_Achr9G15000_001 Musa acuminata GSMUA_Achr9G15000_001 N 0.000
LPERR02G27220 Leersia perrieri LPERR02G27220 N 0.000
LPERR03G01610 Leersia perrieri LPERR03G01610 N 0.000
F775_03517 Aegilops tauschii F775_03517 N 0.000
BRADI3G58360 Brachypodium distachyon BRADI3G58360 N 0.000
BRADI3G38510 Brachypodium distachyon BRADI3G38510 N 0.000
BHLH67 Arabidopsis thaliana AT3G61950 N 0.000
BGIOSGA005582 Oryza indica BGIOSGA005582 N 0.000
BGIOSGA011741 Oryza indica BGIOSGA011741 N 0.000
BGIOSGA032814 Oryza indica BGIOSGA032814 N 0.000
Bo2g075510 Brassica oleracea Bo2g075510 N 0.000
Bo4g006950 Brassica oleracea Bo4g006950 N 0.000
Bo8g097470 Brassica oleracea Bo8g097470 N 0.000
Bra007644 Brassica rapa Bra007644 N 0.000
Bra008017 Brassica rapa Bra008017 N 0.000
BRADI1G71990 Brachypodium distachyon BRADI1G71990 N 0.000
BRADI1G77070 Brachypodium distachyon BRADI1G77070 N 0.000
BRADI2G22810 Brachypodium distachyon BRADI2G22810 N 0.000
LPERR05G23220 Leersia perrieri LPERR05G23220 N 0.000
LPERR09G09700 Leersia perrieri LPERR09G09700 N 0.000
LPERR10G05620 Leersia perrieri LPERR10G05620 N 0.000
ONIVA02G30660 Oryza nivara ONIVA02G30660 N 0.000
ONIVA02G35790 Oryza nivara ONIVA02G35790 N 0.000
ONIVA10G07810 Oryza nivara ONIVA10G07810 N 0.000
OPUNC02G30580 Oryza punctata OPUNC02G30580 N 0.000
OPUNC03G01600 Oryza punctata OPUNC03G01600 N 0.000
OPUNC03G06240 Oryza punctata OPUNC03G06240 N 0.000
OPUNC10G07050 Oryza punctata OPUNC10G07050 N 0.000
ORGLA02G0287300 Oryza glaberrima ORGLA02G0287300 N 0.000
ORGLA03G0015000 Oryza glaberrima ORGLA03G0015000 N 0.000
ORGLA10G0067600 Oryza glaberrima ORGLA10G0067600 N 0.000
ORUFI02G34810 Oryza rufipogon ORUFI02G34810 N 0.000
ORUFI03G01470 Oryza rufipogon ORUFI03G01470 N 0.000
OMERI03G01680 Oryza meridionalis OMERI03G01680 N 0.000
OMERI02G31750 Oryza meridionalis OMERI02G31750 N 0.000
OGLUM10G07850 Oryza glumaepatula OGLUM10G07850 N 0.000
MLOC_55870 Hordeum vulgare MLOC_55870 N 0.000
MLOC_60291 Hordeum vulgare MLOC_60291 N 0.000
MTR_8g024210 Medicago truncatula MTR_8g024210 N 0.000
OB02G40170 Oryza brachyantha OB02G40170 N 0.000
OB03G11710 Oryza brachyantha OB03G11710 N 0.000
OB03G16590 Oryza brachyantha OB03G16590 N 0.000
OB10G16200 Oryza brachyantha OB10G16200 N 0.000
OBART02G33270 Oryza barthii OBART02G33270 N 0.000
OBART03G01740 Oryza barthii OBART03G01740 N 0.000
OBART10G08120 Oryza barthii OBART10G08120 N 0.000
OGLUM02G33770 Oryza glumaepatula OGLUM02G33770 N 0.000
OGLUM03G01710 Oryza glumaepatula OGLUM03G01710 N 0.000
ORUFI10G08570 Oryza rufipogon ORUFI10G08570 N 0.000