CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sakowv30000567m.g
(
Saccoglossus kowalevskii
)
p53
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00870 (P53)
IPR011615
Sakowv30000567m.g
T311260_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23920417_peptide
p53
165
359
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920418_peptide
p53
154
348
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920419_peptide
p53
169
363
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920420_peptide
p53
165
359
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920421_peptide
p53
78
272
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920422_peptide
p53
60
254
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920423_peptide
p53
78
272
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920424_peptide
p53
60
254
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920425_peptide
p53
154
348
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
23920426_peptide
p53
154
348
PTVPSNTDYMGDYGFEISMASSQTLSKTATWTYSDLVKKLYVRMGVTCPIKFKTHTRPPPGSIIRAMPVFKRPEHVKEVVKRCPNHASTKENNEGHPAPAHLLRCENVQAQYAEDHTTGRQSVVVPYENPQVGTEYITCLYAFMCFSSCVGGLNRRPIQVIFQMEKDGLVLGRRVLDVRICACPGRDRKSDEKRC
Links
Other
p53
family TFs
Other
Saccoglossus kowalevskii
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sakowv30019677m.g
Saccoglossus kowalevskii
Sakowv30019677m.g
N
0.835