CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_65647
(
Daphnia pulex
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
DAPPUDRAFT_65647
T311553_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.741
0.741
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.741
0.741
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX65177
Paired box
1
113
GQGRVNQLGGVFINGRPLPNHIRLKIVELAAAGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKSSSSGSGEAERKSEDYRRETANNNIFSWEFRDRPSHKVK
Links
Other
Paired box
family TFs
Other
Daphnia pulex
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KGM_02686
Danaus plexippus
KGM_02686
I
0.903
ISCW003096
Ixodes scapularis
ISCW003096
I
0.822
PEQ_0000701201
Parascaris equorum
PEQ_0000701201
I
0.817
SNAPOd2T00016386001
Oikopleura dioica
SNAPOd2T00016386001
I
0.800
ACEP15310
Atta cephalotes
ACEP15310
I
0.794
SROB_0000822501
Schistosoma rodhaini
SROB_0000822501
I
0.790
CLEC009745
Cimex lectularius
CLEC009745
I
0.784
HHAL001219-PA
Halyomorpha halys
HHAL001219-PA
I
0.784
ENSTSYG00000008085
Tarsius syrichta
ENSTSYG00000008085
I
0.782
PAX5
Tupaia belangeri
ENSTBEG00000007983
I
0.782
PAX5
Tursiops truncatus
ENSTTRG00000006049
I
0.782
OFLC_0000380401
Onchocerca flexuosa
OFLC_0000380401
I
0.776
SMTD_0001918101
Schistosoma mattheei
SMTD_0001918101
I
0.774
SINV15897
Solenopsis invicta
SINV15897
I
0.774
SBAD_0001213701
Soboliphyme baturini
SBAD_0001213701
I
0.768
AFUN002668
Anopheles funestus
AFUN002668
I
0.759
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.757
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.757
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.750
ENSORLG00000019389
Oryzias latipes
ENSORLG00000019389
I
0.750
Alligator_sinensis_CCG006492.1
Alligator sinensis
Alligator_sinensis_CCG006492.1
I
0.741
PAX7
Homo sapiens
ENSG00000009709
D
0.741
Pax7
Dipodomys ordii
ENSDORG00000011854
I
0.741
PAX7
Procavia capensis
ENSPCAG00000005303
I
0.741
ENSMODG00000025571
Monodelphis domestica
ENSMODG00000025571
I
0.741
ENSTNIG00000013141
Tetraodon nigroviridis
ENSTNIG00000013141
I
0.737
LCUP011796
Lucilia cuprina
LCUP011796
I
0.734
Sjc_0077510
Schistosoma japonicum
Sjc_0077510
I
0.732
ACEP15304
Atta cephalotes
ACEP15304
I
0.732
ADIR011362
Anopheles dirus
ADIR011362
I
0.731
pax6a
Danio rerio
ENSDARG00000103379
I
0.729
AQUA004184
Anopheles quadriannulatus
AQUA004184
I
0.727
HPBE_0000479901
Heligmosomoides bakeri
HPBE_0000479901
I
0.725
PAX8
Vicugna pacos
ENSVPAG00000003973
I
0.722
CpipJ_CPIJ009206
Culex pipiens
CpipJ_CPIJ009206
I
0.720
CPIJ009206
Culex quinquefasciatus
CPIJ009206
I
0.720
BGLB002028
Biomphalaria glabrata
BGLB002028
I
0.719
pax6b
Danio rerio
ENSDARG00000045936
I
0.719
AEPI004837
Anopheles epiroticus
AEPI004837
I
0.718
Ogr15337
Ophisaurus gracilis
Ogr15337
I
0.707
AMAM016481
Anopheles maculatus
AMAM016481
I
0.704
CPIJ006494
Culex quinquefasciatus
CPIJ006494
I
0.703
CpipJ_CPIJ006494
Culex pipiens
CpipJ_CPIJ006494
I
0.703