PAX8 (Equus caballus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 ENSECAG00000009244 T311625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.972 0.972
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.972 0.972
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.972 0.972
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.972 0.972
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.972 0.972
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.915 0.915
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.915 0.915
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.915 0.915
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.915 0.915
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.915 0.915
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.915 0.915
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.915 0.915
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.915 0.915
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.915 0.915
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.915 0.915
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.915 0.915
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.915 0.915
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.915 0.915
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.915 0.915
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.915 0.915
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.915 0.915
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.915 0.915
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.915 0.915
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.915 0.915
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.901 0.901
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.775 0.775
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.775 0.775
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.775 0.775
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN

NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.704 0.704
egl-38
M02426_2.00
Caenorhabditis elegans
ACCGTGAYCAC

GTGRTCACGGT
PBM
Weirauch et al.(2014)
pTH8981
0.704 0.704
pax-2
M00706_2.00
Caenorhabditis elegans
RMSCRTRACS

SGTYAYGSKY
PBM
Narasimhan et al.(2015)
pTH10794
0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000007405 Paired box 1 71

Links

Other Paired box family TFs
Other Equus caballus TFs

105 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.704
ANCDUO_11516 Ancylostoma duodenale ANCDUO_11516 I 0.703
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.901
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.859
AALB006342 Anopheles albimanus AALB006342 I 0.781
AARA001120 Anopheles arabiensis AARA001120 I 0.781
AATE007772 Anopheles atroparvus AATE007772 I 0.719
ACHR009800 Anopheles christyi ACHR009800 I 0.775
ACUA027429 Anopheles culicifacies ACUA027429 I 0.775
ADAC004542 Anopheles darlingi ADAC004542 I 0.781
ADIR000964 Anopheles dirus ADIR000964 I 0.761
AFAF010901 Anopheles farauti AFAF010901 I 0.761
AFUN011579 Anopheles funestus AFUN011579 I 0.775
AGAP000057 Anopheles gambiae AGAP000057 I 0.775
AMAM018366 Anopheles maculatus AMAM018366 I 0.742
AMEC016969 Anopheles melas AMEC016969 I 0.775
AMEM003247 Anopheles merus AMEM003247 I 0.775
AMIN002123 Anopheles minimus AMIN002123 I 0.775
ASIS021176 Anopheles sinensis ASIS021176 I 0.775
ASTEI06196 Anopheles stephensi ASTEI06196 I 0.775
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.789
ASU_03705 Ascaris suum ASU_03705 I 0.789
ACEP12359 Atta cephalotes ACEP12359 I 0.761
BGLB002026 Biomphalaria glabrata BGLB002026 N 0.704
Bm1956 Brugia malayi Bm1956 I 0.789
pax-2 Caenorhabditis elegans WBGene00003938 D 0.704
CJA34444 Caenorhabditis japonica CJA34444 I 0.719
CLEC006620 Cimex lectularius CLEC006620 I 0.722
pax2/5/8-b Ciona intestinalis ENSCING00000005977 I 0.789
pax2a Danio rerio ENSDARG00000028148 I 0.930
pax8 Danio rerio ENSDARG00000015879 I 0.915
pax2b Danio rerio ENSDARG00000032578 D 0.915
DAPPUDRAFT_311028 Daphnia pulex DAPPUDRAFT_311028 I 0.761
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.732
Pax8 Dipodomys ordii ENSDORG00000002606 I 0.972
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.704
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.859
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.789
GF20618 Drosophila ananassae FBgn0097624 I 0.775
GH23966 Drosophila grimshawi FBgn0131423 I 0.789
GI14046 Drosophila mojavensis FBgn0136800 I 0.789
GL18401 Drosophila persimilis FBgn0156002 I 0.789
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.789
GM13025 Drosophila sechellia FBgn0167956 I 0.746
GJ13730 Drosophila virilis FBgn0200951 I 0.789
GK13586 Drosophila willistoni FBgn0215594 I 0.789
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.789
D915_05650 Fasciola hepatica D915_05650 N 0.704
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.915
pax8 Gasterosteus aculeatus ENSGACG00000016747 I 0.887
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.732
HHAL006987-PA Halyomorpha halys HHAL006987-PA I 0.722
Hsal_05017--XP_001122481.1_APIME Harpegnathos saltator Hsal_05017--XP_001122481.1_APIME I 0.761
HelroG124549 Helobdella robusta HelroG124549 I 0.789
PAX5 Homo sapiens ENSG00000196092 D 0.969
PAX7 Homo sapiens ENSG00000009709 D 0.704
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.901
ENSLOCG00000015261 Lepisosteus oculatus ENSLOCG00000015261 I 0.873
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.901
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.789
LOAG_00159 Loa loa LOAG_00159 I 0.789
LotgiG135549 Lottia gigantea LotgiG135549 I 0.803
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.789
MESCA003563 Megaselia scalaris MESCA003563 I 0.789
PAX8 Microcebus murinus ENSMICG00000003265 I 0.915
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.704
Pax5 Mus musculus ENSMUSG00000014030 D 0.915
NV16807 Nasonia vitripennis NV16807 I 0.746
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.915
OFLC_0001261901 Onchocerca flexuosa OFLC_0001261901 I 0.730
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.930
ENSOANG00000029256 Ornithorhynchus anatinus ENSOANG00000029256 I 0.845
pax8 Oryzias latipes ENSORLG00000007225 I 0.915
PAX8 Pan troglodytes ENSPTRG00000012380 I 0.915
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.732
ENSPSIG00000012152 Pelodiscus sinensis ENSPSIG00000012152 I 0.971
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.930
PAX7 Procavia capensis ENSPCAG00000005303 I 0.704
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.887
Pax8 Rattus norvegicus ENSRNOG00000026203 D 0.986
SSLN_0001596201 Schistocephalus solidus SSLN_0001596201 I 0.716
Sjc_0065980 Schistosoma japonicum Sjc_0065980 I 0.712
ENSSARG00000014324 Sorex araneus ENSSARG00000014324 I 0.901
SPER_0000498301 Spirometra erinaceieuropaei SPER_0000498301 I 0.746
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.803
L889_g28670 Steinernema feltiae L889_g28670 I 0.803
L898_g18055 Steinernema monticolum L898_g18055 I 0.803
L892_g26455 Steinernema scapterisci L892_g26455 I 0.789
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.718
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.718
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.718
ENSSSCG00000016229 Sus scrofa ENSSSCG00000016229 I 0.719
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.789
ENSTRUG00000014051 Takifugu rubripes ENSTRUG00000014051 I 0.704
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.944
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.732
TELCIR_18859 Teladorsagia circumcincta TELCIR_18859 I 0.746
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.803
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.915
pax8 Tetraodon nigroviridis ENSTNIG00000009029 I 0.887
D917_02818 Trichinella nativa D917_02818 I 0.797
TRE_0001207401 Trichobilharzia regenti TRE_0001207401 I 0.718
pax5.L Xenopus laevis XB-GENE-865318 I 0.915
pax2.L Xenopus laevis XB-GENE-486805 I 0.915
pax8 Xenopus tropicalis XB-GENE-483693 I 1.000