CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOANG00000029256
(
Ornithorhynchus anatinus
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
ENSOANG00000029256
T311720_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.930
0.930
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR
YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.915
0.915
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN
NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.887
0.887
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.887
0.887
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.887
0.887
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.887
0.887
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.887
0.887
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.887
0.887
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.887
0.887
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.887
0.887
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG
CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.887
0.887
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.887
0.887
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.887
0.887
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.887
0.887
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.887
0.887
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.887
0.887
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.887
0.887
PAX5
M11210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.887
0.887
PAX5
M11211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.887
0.887
PAX5
M11212_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.887
0.887
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.859
0.859
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.859
0.859
PAX8
M11205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.859
0.859
PAX8
M11206_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.859
0.859
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.859
0.859
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.789
0.789
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.789
0.789
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.789
0.789
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000031580
Paired box
49
119
LRDAPYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINR
Links
Other
Paired box
family TFs
Other
Ornithorhynchus anatinus
TFs
151 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSACAG00000011033
Anolis carolinensis
ENSACAG00000011033
I
0.930
Ogr18043
Ophisaurus gracilis
Ogr18043
I
0.930
Pax-2
Gallus gallus
ENSGALG00000005689
I
0.930
pax2
Xenopus tropicalis
XB-GENE-486801
D
0.930
PAX2
Homo sapiens
ENSG00000075891
D
0.930
pax2.L
Xenopus laevis
XB-GENE-486805
I
0.930
pax2b
Danio rerio
ENSDARG00000032578
D
0.915
ENSONIG00000018496
Oreochromis niloticus
ENSONIG00000018496
I
0.915
pax2a
Takifugu rubripes
ENSTRUG00000008891
I
0.915
ENSPFOG00000013202
Poecilia formosa
ENSPFOG00000013202
I
0.915
ENSGMOG00000000463
Gadus morhua
ENSGMOG00000000463
I
0.915
ENSLACG00000013159
Latimeria chalumnae
ENSLACG00000013159
I
0.901
ENSPFOG00000003702
Poecilia formosa
ENSPFOG00000003702
I
0.901
pax2a
Danio rerio
ENSDARG00000028148
I
0.901
ENSONIG00000016065
Oreochromis niloticus
ENSONIG00000016065
I
0.901
pax2a
Gasterosteus aculeatus
ENSGACG00000008391
I
0.901
pax2b
Gasterosteus aculeatus
ENSGACG00000002432
I
0.901
PAX5
Anolis carolinensis
ENSACAG00000011646
I
0.901
ENSAMXG00000005158
Astyanax mexicanus
ENSAMXG00000005158
I
0.901
ENSLOCG00000012825
Lepisosteus oculatus
ENSLOCG00000012825
I
0.901
ENSPFOG00000019830
Poecilia formosa
ENSPFOG00000019830
I
0.887
ENSPANG00000025475
Papio anubis
ENSPANG00000025475
I
0.887
ENSOGAG00000004773
Otolemur garnettii
ENSOGAG00000004773
I
0.887
PAX5
Oryctolagus cuniculus
ENSOCUG00000012281
I
0.887
ENSONIG00000000205
Oreochromis niloticus
ENSONIG00000000205
I
0.887
PAX5
Ochotona princeps
ENSOPRG00000000734
I
0.887
ENSPPYG00000019064
Pongo abelii
ENSPPYG00000019064
I
0.887
pax8
Oryzias latipes
ENSORLG00000007225
I
0.887
PAX5
Procavia capensis
ENSPCAG00000004660
I
0.887
ENSSSCG00000005345
Sus scrofa
ENSSSCG00000005345
I
0.887
ENSP00000350844-D1
Bos grunniens
ENSP00000350844-D1
I
0.887
Brh_R001926
Buceros rhinoceros
Brh_R001926
I
0.887
Afo_R005136
Aptenodytes forsteri
Afo_R005136
I
0.887
ENSP00000350844
Macaca fascicularis
ENSP00000350844
I
0.887
Gfo_R013093
Geospiza fortis
Gfo_R013093
I
0.887
Pvit_15554
Pogona vitticeps
Pvit_15554
I
0.887
XP_002935920
Xenopus tropicalis
XP_002935920
I
0.887
Myotis_brandtii_PAX5_10017827
Myotis brandtii
Myotis_brandtii_PAX5_10017827
I
0.887
Aan_R002178
Calypte anna
Aan_R002178
I
0.887
ENSTSYG00000001117
Tarsius syrichta
ENSTSYG00000001117
I
0.887
pax5.L
Xenopus laevis
XB-GENE-865318
I
0.887
Pax5
Rattus norvegicus
ENSRNOG00000024729
I
0.887
PAX5
Pteropus vampyrus
ENSPVAG00000000054
I
0.887
ENSSTOG00000024354
Ictidomys tridecemlineatus
ENSSTOG00000024354
I
0.887
PAX5
Taeniopygia guttata
ENSTGUG00000007215
I
0.887
pax2b
Takifugu rubripes
ENSTRUG00000011987
I
0.887
ENSOARG00000011518
Ovis aries
ENSOARG00000011518
I
0.887
PAX5
Pan troglodytes
ENSPTRG00000020936
I
0.887
pax8
Tetraodon nigroviridis
ENSTNIG00000009029
I
0.887
ENSCSAG00000010751
Chlorocebus sabaeus
ENSCSAG00000010751
I
0.887
ENSAMEG00000010127
Ailuropoda melanoleuca
ENSAMEG00000010127
I
0.887
pax8
Danio rerio
ENSDARG00000015879
I
0.887
PAX5
Equus caballus
ENSECAG00000000551
I
0.887
ENSFALG00000012983
Ficedula albicollis
ENSFALG00000012983
I
0.887
PAX5
Echinops telfairi
ENSETEG00000002360
I
0.887
ENSAMXG00000009227
Astyanax mexicanus
ENSAMXG00000009227
I
0.887
PAX5
Bos taurus
ENSBTAG00000012498
I
0.887
PAX5
Callithrix jacchus
ENSCJAG00000010379
I
0.887
PAX5
Cavia porcellus
ENSCPOG00000009987
I
0.887
PAX5
Ornithorhynchus anatinus
ENSOANG00000007579
I
0.887
PAX5
Choloepus hoffmanni
ENSCHOG00000003521
I
0.887
PAX5
Canis familiaris
ENSCAFG00000002357
I
0.887
PAX5
Felis catus
ENSFCAG00000001628
I
0.887
PAX5
Erinaceus europaeus
ENSEEUG00000012531
I
0.887
PAX5
Myotis lucifugus
ENSMLUG00000012652
I
0.887
PAX5
Microcebus murinus
ENSMICG00000017679
I
0.887
PAX5
Loxodonta africana
ENSLAFG00000028851
I
0.887
PAX5
Monodelphis domestica
ENSMODG00000002720
I
0.887
ENSMPUG00000006012
Mustela putorius furo
ENSMPUG00000006012
I
0.887
ENSNLEG00000003664
Nomascus leucogenys
ENSNLEG00000003664
I
0.887
Pax5
Mus musculus
ENSMUSG00000014030
D
0.887
PAX5
Gorilla gorilla
ENSGGOG00000003633
I
0.887
ENSLOCG00000015261
Lepisosteus oculatus
ENSLOCG00000015261
I
0.887
Pax5B
Gallus gallus
ENSGALG00000016431
D
0.887
PAX5
Homo sapiens
ENSG00000196092
D
0.887
pax8
Gasterosteus aculeatus
ENSGACG00000016747
I
0.887
ENSPSIG00000012152
Pelodiscus sinensis
ENSPSIG00000012152
I
0.882
pax8
Xenopus tropicalis
XB-GENE-483693
I
0.875
Pax5
Dipodomys ordii
ENSDORG00000015818
I
0.873
Pax8
Rattus norvegicus
ENSRNOG00000026203
D
0.871
Pax8
Dipodomys ordii
ENSDORG00000002606
I
0.859
pax5
Tetraodon nigroviridis
ENSTNIG00000005085
I
0.859
PAX8
Ochotona princeps
ENSOPRG00000012910
I
0.845
PAX8
Microcebus murinus
ENSMICG00000003265
I
0.845
PAX8
Pan troglodytes
ENSPTRG00000012380
I
0.845
ENSSARG00000014324
Sorex araneus
ENSSARG00000014324
I
0.845
PAX8
Equus caballus
ENSECAG00000009244
I
0.845
pax8.L
Xenopus laevis
XB-GENE-865008
I
0.831
tetur29g01000
Tetranychus urticae
tetur29g01000
I
0.831
D917_02818
Trichinella nativa
D917_02818
I
0.826
YQE_12361
Dendroctonus ponderosae
YQE_12361
I
0.803
ACEP12359
Atta cephalotes
ACEP12359
I
0.803
LLOJ002076
Lutzomyia longipalpis
LLOJ002076
I
0.803
Hsal_05017--XP_001122481.1_APIME
Harpegnathos saltator
Hsal_05017--XP_001122481.1_APIME
I
0.803
GJ13730
Drosophila virilis
FBgn0200951
I
0.803
GL18401
Drosophila persimilis
FBgn0156002
I
0.803
HelroG124549
Helobdella robusta
HelroG124549
I
0.803
spa-sv
Drosophila pseudoobscura
FBgn0249275
I
0.803
GK13586
Drosophila willistoni
FBgn0215594
I
0.803
SINV11533
Solenopsis invicta
SINV11533
I
0.803
GI14046
Drosophila mojavensis
FBgn0136800
I
0.803
GH23966
Drosophila grimshawi
FBgn0131423
I
0.803
NV16807
Nasonia vitripennis
NV16807
I
0.803
MESCA003563
Megaselia scalaris
MESCA003563
I
0.803
DAPPUDRAFT_311028
Daphnia pulex
DAPPUDRAFT_311028
I
0.789
GF20618
Drosophila ananassae
FBgn0097624
I
0.789
HHAL006987-PA
Halyomorpha halys
HHAL006987-PA
I
0.778
CLEC006620
Cimex lectularius
CLEC006620
I
0.778
L596_g7168
Steinernema carpocapsae
L596_g7168
I
0.775
ADIR000964
Anopheles dirus
ADIR000964
I
0.775
L889_g28670
Steinernema feltiae
L889_g28670
I
0.775
AFAF010901
Anopheles farauti
AFAF010901
I
0.775
L898_g18055
Steinernema monticolum
L898_g18055
I
0.775
AMAM018366
Anopheles maculatus
AMAM018366
I
0.774
RPRC001909
Rhodnius prolixus
RPRC001909
I
0.770
L892_g26455
Steinernema scapterisci
L892_g26455
I
0.761
AMEC016969
Anopheles melas
AMEC016969
I
0.761
ASTEI06196
Anopheles stephensi
ASTEI06196
I
0.761
AMEM003247
Anopheles merus
AMEM003247
I
0.761
AMIN002123
Anopheles minimus
AMIN002123
I
0.761
ASIS021176
Anopheles sinensis
ASIS021176
I
0.761
pax2/5/8-b
Ciona intestinalis
ENSCING00000005977
I
0.761
AGAP000057
Anopheles gambiae
AGAP000057
I
0.761
LotgiG135549
Lottia gigantea
LotgiG135549
I
0.761
ACHR009800
Anopheles christyi
ACHR009800
I
0.761
ACUA027429
Anopheles culicifacies
ACUA027429
I
0.761
AFUN011579
Anopheles funestus
AFUN011579
I
0.761
AATE007772
Anopheles atroparvus
AATE007772
I
0.750
LOAG_00159
Loa loa
LOAG_00159
I
0.746
GM13025
Drosophila sechellia
FBgn0167956
I
0.746
SMUV_0000412301
Syphacia muris
SMUV_0000412301
I
0.746
HCOI01205400
Haemonchus contortus
HCOI01205400
I
0.746
nLs.2.1.2.g05197
Litomosoides sigmodontis
nLs.2.1.2.g05197
I
0.746
nDi.2.2.2.g01404
Dirofilaria immitis
nDi.2.2.2.g01404
I
0.746
EEL_0001009001
Elaeophora elaphi
EEL_0001009001
I
0.746
Bm1956
Brugia malayi
Bm1956
I
0.746
TELCIR_10899
Teladorsagia circumcincta
TELCIR_10899
I
0.746
ASU_03705
Ascaris suum
ASU_03705
I
0.746
ALUE_0001419501
Ascaris lumbricoides
ALUE_0001419501
I
0.746
DICVIV_04707
Dictyocaulus viviparus
DICVIV_04707
I
0.746
SPER_0000498301
Spirometra erinaceieuropaei
SPER_0000498301
I
0.732
RSKR_0000585500
Rhabditophanes kr3021
RSKR_0000585500
I
0.718
SPAL_0000372000
Strongyloides papillosus
SPAL_0000372000
I
0.718
SSTP_0000522800
Strongyloides stercoralis
SSTP_0000522800
I
0.718
D915_05650
Fasciola hepatica
D915_05650
N
0.718
SVE_0227200
Strongyloides venezuelensis
SVE_0227200
I
0.718
SSLN_0001596201
Schistocephalus solidus
SSLN_0001596201
I
0.716
LotgiG99097
Lottia gigantea
LotgiG99097
I
0.704
BGLB002026
Biomphalaria glabrata
BGLB002026
N
0.704
Sjc_0065980
Schistosoma japonicum
Sjc_0065980
I
0.704
PTRK_0001603600
Parastrongyloides trichosuri
PTRK_0001603600
I
0.704