ISCW000175 (Ixodes scapularis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 ISCW000175 T311940_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Poxn
M03946_2.00 		Drosophila melanogaster
DGCGTGACSGTCACGSY
RSCGTGACSGTCACGCH		 SELEX
Nitta et al.(2015)
Poxn_1 		0.787 0.787
Poxn
M03947_2.00 		Drosophila melanogaster
RSCGKGACSGTTMCGSW
WSCGKAACSGTCMCGSY		 SELEX
Nitta et al.(2015)
Poxn_2 		0.787 0.787
Poxn
M03948_2.00 		Drosophila melanogaster
NCGTTCCGGAACGD
HCGTTCCGGAACGN		 SELEX
Nitta et al.(2015)
Poxn_3 		0.787 0.787
Poxn
M06437_2.00 		Drosophila melanogaster
RSCGTGACG
CGTCACGSY		 B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130 		0.787 0.787
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.719 0.719
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.719 0.719
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.719 0.719
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.719 0.719
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.719 0.719
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.719 0.719
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.719 0.719
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.719 0.719
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.719 0.719
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.719 0.719
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.719 0.719
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.719 0.719
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.719 0.719
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.719 0.719
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.719 0.719
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.719 0.719
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.719 0.719
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.719 0.719
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.719 0.719
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ISCW000175-PA Paired box 10 98

Links

Other Paired box family TFs
Other Ixodes scapularis TFs

135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.866
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.866
ACHR009211 Anopheles christyi ACHR009211 I 0.843
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.818
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.818
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.818
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I 0.809
LotgiG99097 Lottia gigantea LotgiG99097 I 0.809
AMAM005900 Anopheles maculatus AMAM005900 I 0.798
AGAP008818 Anopheles gambiae AGAP008818 I 0.798
AFAF002012 Anopheles farauti AFAF002012 I 0.798
LCUP005878 Lucilia cuprina LCUP005878 I 0.798
ACOM039288 Anopheles coluzzii ACOM039288 I 0.798
AMEM011238 Anopheles merus AMEM011238 I 0.798
AATE014886 Anopheles atroparvus AATE014886 I 0.798
AMEC005358 Anopheles melas AMEC005358 I 0.798
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I 0.798
MDOA010966 Musca domestica MDOA010966 I 0.798
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.795
AFUN008226 Anopheles funestus AFUN008226 I 0.795
L798_15745 Zootermopsis nevadensis L798_15745 I 0.787
ASIS007673 Anopheles sinensis ASIS007673 I 0.787
GH20564 Drosophila grimshawi FBgn0128027 I 0.775
RPRC011448 Rhodnius prolixus RPRC011448 N 0.775
AALB001179 Anopheles albimanus AALB001179 I 0.775
AARA010781 Anopheles arabiensis AARA010781 I 0.775
AEPI004837 Anopheles epiroticus AEPI004837 I 0.775
ACUA016445 Anopheles culicifacies ACUA016445 I 0.775
CGI_10012686 Crassostrea gigas CGI_10012686 I 0.775
ADIR011362 Anopheles dirus ADIR011362 I 0.775
NV12756 Nasonia vitripennis NV12756 I 0.764
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.764
YQE_05418 Dendroctonus ponderosae YQE_05418 N 0.753
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.753
ACYPI52155 Acyrthosiphon pisum ACYPI52155 I 0.753
pax6a Danio rerio ENSDARG00000103379 I 0.743
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.730
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.730
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.730
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I 0.730
SPU_027334 Strongylocentrotus purpuratus SPU_027334 I 0.730
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.730
EFV60539 Trichinella spiralis EFV60539 I 0.730
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.722
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I 0.720
pax2 Xenopus tropicalis XB-GENE-486801 D 0.719
PAX5 Echinops telfairi ENSETEG00000002360 I 0.719
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.719
XP_002935920 Xenopus tropicalis XP_002935920 I 0.719
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.719
pax2b Danio rerio ENSDARG00000032578 D 0.719
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.719
PAX5 Equus caballus ENSECAG00000000551 I 0.719
PAX5 Felis catus ENSFCAG00000001628 I 0.719
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.719
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.719
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.719
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.719
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.719
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.719
pax2a Danio rerio ENSDARG00000028148 I 0.719
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.719
Cflo_00736--XP_001122746.1_APIME Camponotus floridanus Cflo_00736--XP_001122746.1_APIME I 0.719
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.719
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.719
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I 0.719
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.719
ACEP20056 Atta cephalotes ACEP20056 I 0.719
pax2.L Xenopus laevis XB-GENE-486805 I 0.719
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.719
PAX2 Homo sapiens ENSG00000075891 D 0.719
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.719
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.719
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.719
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.719
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.719
PAX5 Canis familiaris ENSCAFG00000002357 I 0.719
PAX5 Bos taurus ENSBTAG00000012498 I 0.719
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.719
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I 0.719
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.719
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.719
Aan_R002178 Calypte anna Aan_R002178 I 0.719
PAX5 Procavia capensis ENSPCAG00000004660 I 0.719
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.719
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.719
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.719
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.719
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.719
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.719
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.719
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.719
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.719
Pax5 Mus musculus ENSMUSG00000014030 D 0.719
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.719
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.719
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.719
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.719
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.719
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.719
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.719
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.719
Pax5B Gallus gallus ENSGALG00000016431 D 0.719
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.719
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.719
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.719
Pax-2 Gallus gallus ENSGALG00000005689 I 0.719
PAX5 Homo sapiens ENSG00000196092 D 0.719
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.719
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.719
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.719
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.719
PAX5 Microcebus murinus ENSMICG00000017679 I 0.719
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.719
LCUP013028 Lucilia cuprina LCUP013028 I 0.709
Bm1956 Brugia malayi Bm1956 I 0.708
nLs.2.1.2.g05197 Litomosoides sigmodontis nLs.2.1.2.g05197 I 0.708
PEQ_0001166701 Parascaris equorum PEQ_0001166701 I 0.708
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.708
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.708
nDi.2.2.2.g01404 Dirofilaria immitis nDi.2.2.2.g01404 I 0.708
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.708
SMUV_0000412301 Syphacia muris SMUV_0000412301 I 0.708
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.708
ASU_03705 Ascaris suum ASU_03705 I 0.708
LLOJ002076 Lutzomyia longipalpis LLOJ002076 I 0.708
pax2b Oryzias latipes ENSORLG00000009321 I 0.708
PAX5 Anolis carolinensis ENSACAG00000011646 I 0.708
pax5.L Xenopus laevis XB-GENE-865318 I 0.708
ACAC_0000893101 Angiostrongylus cantonensis ACAC_0000893101 I 0.708
ALUE_0001419501 Ascaris lumbricoides ALUE_0001419501 I 0.708
EVEC_0001357701 Enterobius vermicularis EVEC_0001357701 I 0.708
EEL_0001009001 Elaeophora elaphi EEL_0001009001 I 0.708
ENSGMOG00000000463 Gadus morhua ENSGMOG00000000463 I 0.708
LOAG_00159 Loa loa LOAG_00159 I 0.708