L798_15745 (Zootermopsis nevadensis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 L798_15745 T311958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.822 0.822
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.822 0.822
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.822 0.822
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.822 0.822
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.700 0.700
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.700 0.700
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.700 0.700
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.700 0.700
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.700 0.700
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.700 0.700
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.700 0.700
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.700 0.700
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.700 0.700
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.700 0.700
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.700 0.700
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.700 0.700
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.700 0.700
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.700 0.700
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.700 0.700
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.700 0.700
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.700 0.700
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.700 0.700
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.700 0.700
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR23176 Paired box 389 478

Links

Other Paired box family TFs
Other Zootermopsis nevadensis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB001179 Anopheles albimanus AALB001179 I 0.811
Aan_R002178 Calypte anna Aan_R002178 I 0.700
AARA010781 Anopheles arabiensis AARA010781 I 0.811
ACEP20056 Atta cephalotes ACEP20056 I 0.742
ACHR009211 Anopheles christyi ACHR009211 I 0.880
ACUA016445 Anopheles culicifacies ACUA016445 I 0.811
ACYPI52155 Acyrthosiphon pisum ACYPI52155 I 0.745
ADIR011362 Anopheles dirus ADIR011362 I 0.936
AEPI004837 Anopheles epiroticus AEPI004837 I 0.936
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.700
AFUN008226 Anopheles funestus AFUN008226 I 0.830
AMAM005900 Anopheles maculatus AMAM005900 I 0.811
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I 0.720
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.935
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.700
Cflo_00736--XP_001122746.1_APIME Camponotus floridanus Cflo_00736--XP_001122746.1_APIME I 0.778
CGI_10012686 Crassostrea gigas CGI_10012686 I 0.767
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.902
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.902
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.741
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.700
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.700
ENSAMXG00000005158 Astyanax mexicanus ENSAMXG00000005158 I 0.700
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.700
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.700
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.700
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.700
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.700
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.700
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.700
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.700
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.700
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.700
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.700
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.700
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.700
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.700
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.700
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.700
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.700
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.737
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.700
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.855
EVEC_0001357701 Enterobius vermicularis EVEC_0001357701 I 0.700
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.700
GH20564 Drosophila grimshawi FBgn0128027 I 0.811
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.783
ISCW000175 Ixodes scapularis ISCW000175 I 0.787
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.700
L889_g28670 Steinernema feltiae L889_g28670 I 0.700
L892_g26455 Steinernema scapterisci L892_g26455 I 0.700
L893_g8856 Steinernema glaseri L893_g8856 I 0.700
L898_g18055 Steinernema monticolum L898_g18055 I 0.700
LCUP005878 Lucilia cuprina LCUP005878 I 0.833
LCUP013028 Lucilia cuprina LCUP013028 I 0.727
LCUP015670 Lucilia cuprina LCUP015670 I 0.714
LLOJ000106 Lutzomyia longipalpis LLOJ000106 I 0.844
LotgiG99097 Lottia gigantea LotgiG99097 I 0.800
MDOA010966 Musca domestica MDOA010966 I 0.833
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.700
NV12756 Nasonia vitripennis NV12756 I 0.811
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I 0.778
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.795
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.700
Pax-2 Gallus gallus ENSGALG00000005689 I 0.700
pax2 Xenopus tropicalis XB-GENE-486801 D 0.700
PAX2 Homo sapiens ENSG00000075891 D 0.700
pax2.L Xenopus laevis XB-GENE-486805 I 0.700
pax2a Danio rerio ENSDARG00000028148 I 0.700
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.700
pax2b Danio rerio ENSDARG00000032578 D 0.700
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.700
PAX5 Bos taurus ENSBTAG00000012498 I 0.700
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.700
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.700
PAX5 Microcebus murinus ENSMICG00000017679 I 0.700
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.700
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.700
PAX5 Homo sapiens ENSG00000196092 D 0.700
PAX5 Felis catus ENSFCAG00000001628 I 0.700
PAX5 Echinops telfairi ENSETEG00000002360 I 0.700
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.700
PAX5 Equus caballus ENSECAG00000000551 I 0.700
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.700
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.700
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.700
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.700
Pax5 Mus musculus ENSMUSG00000014030 D 0.714
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.700
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.700
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.855
PAX5 Canis familiaris ENSCAFG00000002357 I 0.700
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.700
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.855
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.700
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.700
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.700
PAX5 Procavia capensis ENSPCAG00000004660 I 0.700
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.700
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.700
Pax5B Gallus gallus ENSGALG00000016431 D 0.700
PAX6 Homo sapiens ENSG00000007372 D 0.714
pax6a Danio rerio ENSDARG00000103379 I 0.771
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.700
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.700
RPRC001910 Rhodnius prolixus RPRC001910 I 0.700
RPRC011448 Rhodnius prolixus RPRC011448 N 0.811
RSKR_0000585500 Rhabditophanes kr3021 RSKR_0000585500 I 0.700
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.744
SROB_0000822501 Schistosoma rodhaini SROB_0000822501 I 0.710
tetur29g01000 Tetranychus urticae tetur29g01000 I 0.700
XP_002935920 Xenopus tropicalis XP_002935920 I 0.700
YQE_05418 Dendroctonus ponderosae YQE_05418 N 0.811