L798_15746 (Zootermopsis nevadensis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 L798_15746 T311959_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.750 0.750
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.750 0.750
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.750 0.750
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.750 0.750
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.719 0.719
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.719 0.719
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.719 0.719
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.719 0.719
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.719 0.719
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.719 0.719
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.719 0.719
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.719 0.719
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.719 0.719
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.719 0.719
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.719 0.719
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.719 0.719
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.719 0.719
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.719 0.719
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.719 0.719
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.719 0.719
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR23177 Paired box 1 32

Links

Other Paired box family TFs
Other Zootermopsis nevadensis TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PPAI001293 Phlebotomus papatasi PPAI001293 I 0.969
LLOJ000107 Lutzomyia longipalpis LLOJ000107 N 0.969
AMAM006507 Anopheles maculatus AMAM006507 N 0.938
AMIN007195 Anopheles minimus AMIN007195 I 0.938
MESCA000012 Megaselia scalaris MESCA000012 I 0.906
PHUM404840 Pediculus humanus PHUM404840 I 0.875
Ocbimv22007901m.g Octopus bimaculoides Ocbimv22007901m.g I 0.844
BGLB012024 Biomphalaria glabrata BGLB012024 N 0.812
LDEC012325 Leptinotarsa decemlineata LDEC012325 N 0.812
KGM_19741 Danaus plexippus KGM_19741 I 0.781
Cflo_00736--XP_001122746.1_APIME Camponotus floridanus Cflo_00736--XP_001122746.1_APIME I 0.781
CLEC006156 Cimex lectularius CLEC006156 I 0.781
MDOA010966 Musca domestica MDOA010966 I 0.750
CGI_10012686 Crassostrea gigas CGI_10012686 I 0.750
LCUP005878 Lucilia cuprina LCUP005878 I 0.750
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.750
PAX5 Homo sapiens ENSG00000196092 D 0.719
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.719
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.719
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.719
Pax5 Mus musculus ENSMUSG00000014030 D 0.719
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.719
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.719
pax2.L Xenopus laevis XB-GENE-486805 I 0.719
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.719
AMAM010937 Anopheles maculatus AMAM010937 I 0.719
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.719