CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MESCA000012
(
Megaselia scalaris
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00292 (PAX)
IPR001523
MESCA000012
T311994_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY
RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.750
0.750
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW
WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.750
0.750
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD
HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.750
0.750
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG
CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.750
0.750
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MESCA000012-PA
Paired box
1
32
MFAWEIRDQLIKQRICDPNSLPSVSSVNRILR
Links
Other
Paired box
family TFs
Other
Megaselia scalaris
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy