NV12756 (Nasonia vitripennis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 NV12756 T312012_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.839 0.839
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.839 0.839
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.839 0.839
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.839 0.839
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.750 0.750
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.750 0.750
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.742 0.742
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.742 0.742
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.742 0.742
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.742 0.742
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.742 0.742
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.742 0.742
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.742 0.742
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.742 0.742
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.742 0.742
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.742 0.742
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.742 0.742
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.742 0.742
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.742 0.742
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.742 0.742
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.742 0.742
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.742 0.742
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.742 0.742
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.742 0.742
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.734 0.734
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.734 0.734
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.734 0.734
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.734 0.734
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.734 0.734
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.726 0.726
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.726 0.726
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NV12756-PA Paired box 5 129

Links

Other Paired box family TFs
Other Nasonia vitripennis TFs

301 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AALB008493 Anopheles albimanus AALB008493 N 0.000
ACEP16058 Atta cephalotes ACEP16058 N 0.000
ACEP18777 Atta cephalotes ACEP18777 N 0.000
ACHR009374 Anopheles christyi ACHR009374 N 0.000
ACUA028082 Anopheles culicifacies ACUA028082 N 0.000
AEPI004511 Anopheles epiroticus AEPI004511 N 0.000
AFUN001004 Anopheles funestus AFUN001004 N 0.000
AGAP011712 Anopheles gambiae AGAP011712 N 0.000
AMEM014364 Anopheles merus AMEM014364 N 0.000
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N 0.000
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N 0.000
ANCDUO_17822 Ancylostoma duodenale ANCDUO_17822 N 0.000
ANCDUO_27140 Ancylostoma duodenale ANCDUO_27140 N 0.000
Aqu1.211340 Amphimedon queenslandica Aqu1.211340 N 0.000
AQUA010449 Anopheles quadriannulatus AQUA010449 N 0.000
ASTEI10438 Anopheles stephensi ASTEI10438 N 0.000
augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf40912-processed-gene-0.0 N 0.000
BGIBMGA012898 Bombyx mori BGIBMGA012898 N 0.000
BGLB011455 Biomphalaria glabrata BGLB011455 N 0.000
Bm3498 Brugia malayi Bm3498 I 0.000
Brh_R013163 Buceros rhinoceros Brh_R013163 I 0.000
BTMF_0001772901 Brugia timori BTMF_0001772901 N 0.000
CJA31660 Caenorhabditis japonica CJA31660 N 0.000
DICVIV_10715 Dictyocaulus viviparus DICVIV_10715 N 0.000
DILT_0001799701 Diphyllobothrium latum DILT_0001799701 N 0.000
DME_0000818901 Dracunculus medinensis DME_0000818901 N 0.000
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N 0.000
EEL_0001013401 Elaeophora elaphi EEL_0001013401 N 0.000
ENSACAG00000001033 Anolis carolinensis ENSACAG00000001033 I 0.000
ENSDNOG00000008614 Dasypus novemcinctus ENSDNOG00000008614 N 0.000
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.000
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I 0.000
ENSOARG00000011096 Ovis aries ENSOARG00000011096 N 0.000
ENSTGUG00000007802 Taeniopygia guttata ENSTGUG00000007802 I 0.000
ENSTGUG00000013956 Taeniopygia guttata ENSTGUG00000013956 N 0.000
GF19461 Drosophila ananassae FBgn0096470 N 0.000
GG18707 Drosophila erecta FBgn0110916 N 0.000
GD16691 Drosophila simulans FBgn0188280 N 0.000
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N 0.000
HCOI01136500 Haemonchus contortus HCOI01136500 N 0.000
HMEL004264 Heliconius melpomene HMEL004264 N 0.000
HPBE_0001971401 Heligmosomoides bakeri HPBE_0001971401 N 0.000
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I 0.000
Hsal_09270--XP_394607.3_APIME Harpegnathos saltator Hsal_09270--XP_394607.3_APIME N 0.000
ISCW019287 Ixodes scapularis ISCW019287 N 0.000
KGM_15500 Danaus plexippus KGM_15500 N 0.000
L798_01365 Zootermopsis nevadensis L798_01365 N 0.000
LCUP008640 Lucilia cuprina LCUP008640 N 0.000
LDEC010813 Leptinotarsa decemlineata LDEC010813 N 0.000
LOAG_18576 Loa loa LOAG_18576 N 0.000
Minc16694 Meloidogyne incognita Minc16694 N 0.000
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N 0.000
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N 0.000
NBR_0002182001 Nippostrongylus brasiliensis NBR_0002182001 N 0.000
nDi.2.2.2.g08784 Dirofilaria immitis nDi.2.2.2.g08784 N 0.000
NECAME_19347 Necator americanus NECAME_19347 N 0.000
NEMVEDRAFT_v1g200081 Nematostella vectensis NEMVEDRAFT_v1g200081 N 0.000
nLs.2.1.2.g03986 Litomosoides sigmodontis nLs.2.1.2.g03986 N 0.000
nOo.2.0.1.g07550 Onchocerca ochengi nOo.2.0.1.g07550 N 0.000
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N 0.000
nOo.2.0.1.g12879 Onchocerca ochengi nOo.2.0.1.g12879 N 0.000
Ocbimv22013221m.g Octopus bimaculoides Ocbimv22013221m.g N 0.000
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N 0.000
OESDEN_07954 Oesophagostomum dentatum OESDEN_07954 N 0.000
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N 0.000
PEQ_0000468601 Parascaris equorum PEQ_0000468601 N 0.000
PPA14512 Pristionchus pacificus PPA14512 N 0.000
PPAI002123 Phlebotomus papatasi PPAI002123 N 0.000
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N 0.000
SCUD_0001668701 Schistosoma curassoni SCUD_0001668701 I 0.000
SINV17750 Solenopsis invicta SINV17750 I 0.000
Smp_156650 Schistosoma mansoni Smp_156650 N 0.000
SMRZ_0000901601 Schistosoma margrebowiei SMRZ_0000901601 I 0.000
SMUV_0000075501 Syphacia muris SMUV_0000075501 N 0.000
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N 0.000
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N 0.000
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N 0.000
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N 0.000
SROB_0001443501 Schistosoma rodhaini SROB_0001443501 N 0.000
SVUK_0001851801 Strongylus vulgaris SVUK_0001851801 N 0.000
Tal_R008745 Tyto alba Tal_R008745 N 0.000
TCLT_0000604201 Thelazia callipaeda TCLT_0000604201 N 0.000
TCNE_0000641501 Toxocara canis TCNE_0000641501 N 0.000
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N 0.000
WUBG_11141 Wuchereria bancrofti WUBG_11141 N 0.000
YQE_10906 Dendroctonus ponderosae YQE_10906 N 0.000