SINV17241 (Solenopsis invicta)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 SINV17241 T312058_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.719 0.719
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.719 0.719
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.719 0.719
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.719 0.719
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.719 0.719
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.719 0.719
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.719 0.719
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.719 0.719
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.719 0.719
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.719 0.719
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.719 0.719
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.719 0.719
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.719 0.719
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.719 0.719
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.719 0.719
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.719 0.719
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.719 0.719
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.719 0.719
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.702 0.702
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.702 0.702
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.702 0.702
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.702 0.702
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV17241-PA Paired box 1 121

Links

Other Paired box family TFs
Other Solenopsis invicta TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R011602 Aptenodytes forsteri Afo_R011602 N 0.000
ZBTB46 Anolis carolinensis ENSACAG00000003631 N 0.000
ENSAMXG00000017494 Astyanax mexicanus ENSAMXG00000017494 N 0.000
ENSAPLG00000014808 Anas platyrhynchos ENSAPLG00000014808 N 0.000
ZBTB46 Bos taurus ENSBTAG00000016667 N 0.000
ZBTB46 Callithrix jacchus ENSCJAG00000010439 N 0.000
ZBTB46 Cavia porcellus ENSCPOG00000002803 N 0.000
ENSCSAG00000016647 Chlorocebus sabaeus ENSCSAG00000016647 N 0.000
zbtb46 Danio rerio ENSDARG00000078191 N 0.000
ENSFALG00000005952 Ficedula albicollis ENSFALG00000005952 N 0.000
ZBTB46 Homo sapiens ENSG00000130584 N 0.000
ZBTB46 Gallus gallus ENSGALG00000006062 N 0.000
ZBTB46 Gorilla gorilla ENSGGOG00000004815 N 0.000
ENSLACG00000003648 Latimeria chalumnae ENSLACG00000003648 N 0.000
ZBTB46 Loxodonta africana ENSLAFG00000012490 N 0.000
ENSLOCG00000005130 Lepisosteus oculatus ENSLOCG00000005130 N 0.000
ENSMEUG00000015248 Macropus eugenii ENSMEUG00000015248 N 0.000
ZBTB46 Meleagris gallopavo ENSMGAG00000006811 N 0.000
ZBTB46 Microcebus murinus ENSMICG00000012871 N 0.000
ZBTB46 Myotis lucifugus ENSMLUG00000005283 N 0.000
ZBTB46 Macaca mulatta ENSMMUG00000020712 N 0.000
ZBTB46 Monodelphis domestica ENSMODG00000017020 N 0.000
Zbtb46 Mus musculus ENSMUSG00000027583 N 0.000
ZBTB46 Ornithorhynchus anatinus ENSOANG00000004930 N 0.000
ZBTB46 Oryctolagus cuniculus ENSOCUG00000026351 N 0.000
ZBTB46 Otolemur garnettii ENSOGAG00000000852 N 0.000
ENSONIG00000017400 Oreochromis niloticus ENSONIG00000017400 N 0.000
zbtb46 Oryzias latipes ENSORLG00000009686 N 0.000
ENSP00000303102-D1 Bos grunniens ENSP00000303102-D1 N 0.000
ENSPANG00000026190 Papio anubis ENSPANG00000026190 N 0.000
ENSPFOG00000005845 Poecilia formosa ENSPFOG00000005845 N 0.000
ENSPSIG00000015887 Pelodiscus sinensis ENSPSIG00000015887 N 0.000
ZBTB46 Pan troglodytes ENSPTRG00000013754 N 0.000
Zbtb46 Rattus norvegicus ENSRNOG00000014592 N 0.000
ENSSHAG00000017616 Sarcophilus harrisii ENSSHAG00000017616 N 0.000
ENSSTOG00000012003 Ictidomys tridecemlineatus ENSSTOG00000012003 N 0.000
ENSTGUG00000007131 Taeniopygia guttata ENSTGUG00000007131 N 0.000
ENSTNIG00000017877 Tetraodon nigroviridis ENSTNIG00000017877 N 0.000
zbtb46 Takifugu rubripes ENSTRUG00000004720 N 0.000
Myotis_brandtii_Zbtb46_10023447 Myotis brandtii Myotis_brandtii_Zbtb46_10023447 N 0.000
Ogr02171 Ophisaurus gracilis Ogr02171 N 0.000
zbtb46 Xenopus tropicalis XB-GENE-5847062 N 0.000
zbtb46.S Xenopus laevis XB-GENE-5847067 N 0.000
XP_002944155 Xenopus tropicalis XP_002944155 N 0.000