Cflo_05394--XP_001120031.1_APIME (Camponotus floridanus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 Cflo_05394--XP_001120031.1_APIME T312145_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.704 0.704
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.704 0.704
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.704 0.704
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.704 0.704
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.704 0.704
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.704 0.704
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.704 0.704
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.704 0.704
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.704 0.704
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.704 0.704
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.704 0.704
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.704 0.704
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.704 0.704
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.704 0.704
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.704 0.704
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.704 0.704
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.704 0.704
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.704 0.704
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.704 0.704
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.704 0.704
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cflo_05394--XP_001120031.1_APIME Paired box 23 147

Links

Other Paired box family TFs
Other Camponotus floridanus TFs

202 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pax6a Danio rerio ENSDARG00000103379 I 0.986
LCUP013028 Lucilia cuprina LCUP013028 I 0.982
pax6b Danio rerio ENSDARG00000045936 I 0.969
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.963
SINV17241 Solenopsis invicta SINV17241 I 0.950
PAX6 Homo sapiens ENSG00000007372 D 0.943
AAC60302 Xenopus laevis AAC60302 I 0.938
LCUP015670 Lucilia cuprina LCUP015670 I 0.929
ACEP20912 Atta cephalotes ACEP20912 N 0.912
RPRC003362 Rhodnius prolixus RPRC003362 I 0.909
HMEL009702 Heliconius melpomene HMEL009702 I 0.909
Pax6 Mus musculus ENSMUSG00000027168 D 0.893
KGM_02181 Danaus plexippus KGM_02181 I 0.892
PHUM217120 Pediculus humanus PHUM217120 I 0.888
CLEC008733 Cimex lectularius CLEC008733 I 0.887
BGIBMGA009545 Bombyx mori BGIBMGA009545 I 0.873
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.872
LDEC008984 Leptinotarsa decemlineata LDEC008984 I 0.867
ACAC_0001290301 Angiostrongylus cantonensis ACAC_0001290301 I 0.861
ACOC_0000178201 Angiostrongylus costaricensis ACOC_0000178201 I 0.861
ACEP24464 Atta cephalotes ACEP24464 I 0.856
Ocbimv22011111m.g Octopus bimaculoides Ocbimv22011111m.g I 0.856
CLEC008846 Cimex lectularius CLEC008846 I 0.847
SCUD_0000535601 Schistosoma curassoni SCUD_0000535601 I 0.847
RPRC001429 Rhodnius prolixus RPRC001429 I 0.846
DAPPUDRAFT_122807 Daphnia pulex DAPPUDRAFT_122807 I 0.839
YQE_05107 Dendroctonus ponderosae YQE_05107 I 0.837
ECPE_0000273501 Echinostoma caproni ECPE_0000273501 I 0.836
AATE019182 Anopheles atroparvus AATE019182 I 0.836
D915_05709 Fasciola hepatica D915_05709 I 0.836
ANCCEY_08417 Ancylostoma ceylanicum ANCCEY_08417 I 0.833
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.832
PXEA_0002614201 Protopolystoma xenopodis PXEA_0002614201 I 0.827
BGIBMGA009432 Bombyx mori BGIBMGA009432 I 0.824
TRE_0000921601 Trichobilharzia regenti TRE_0000921601 I 0.824
SSLN_0001115101 Schistocephalus solidus SSLN_0001115101 I 0.823
ECPE_0001376401 Echinostoma caproni ECPE_0001376401 I 0.823
ACOM023323 Anopheles coluzzii ACOM023323 I 0.823
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.818
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.818
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.818
AMAM010937 Anopheles maculatus AMAM010937 I 0.816
SPU_006786 Strongylocentrotus purpuratus SPU_006786 I 0.816
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.811
A_03128 Schistosoma haematobium A_03128 I 0.808
SBAD_0001213701 Soboliphyme baturini SBAD_0001213701 I 0.804
CLEC006621 Cimex lectularius CLEC006621 I 0.804
Sjc_0004220 Schistosoma japonicum Sjc_0004220 I 0.800
DILT_0000606101 Diphyllobothrium latum DILT_0000606101 N 0.800
PXEA_0001769401 Protopolystoma xenopodis PXEA_0001769401 N 0.800
SPER_0000208501 Spirometra erinaceieuropaei SPER_0000208501 N 0.798
DILT_0000442801 Diphyllobothrium latum DILT_0000442801 I 0.792
HMEL002395 Heliconius melpomene HMEL002395 N 0.787
OFLC_0001383501 Onchocerca flexuosa OFLC_0001383501 I 0.785
DME_0000186001 Dracunculus medinensis DME_0000186001 N 0.785
LDEC006108 Leptinotarsa decemlineata LDEC006108 N 0.784
nRc.2.0.1.g00894 Romanomermis culicivorax nRc.2.0.1.g00894 I 0.784
WUBG_13045 Wuchereria bancrofti WUBG_13045 I 0.779
ALUE_0000749601 Ascaris lumbricoides ALUE_0000749601 N 0.776
TCLT_0000192601 Thelazia callipaeda TCLT_0000192601 N 0.774
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N 0.772
LOAG_04187 Loa loa LOAG_04187 N 0.772
nLs.2.1.2.g01338 Litomosoides sigmodontis nLs.2.1.2.g01338 N 0.768
WBGene00241130 Onchocerca volvulus WBGene00241130 I 0.768
nDi.2.2.2.g03678 Dirofilaria immitis nDi.2.2.2.g03678 I 0.768
Bm14693 Brugia malayi Bm14693 I 0.768
nOo.2.0.1.g04580 Onchocerca ochengi nOo.2.0.1.g04580 I 0.768
nAv.1.0.1.g05236 Acanthocheilonema viteae nAv.1.0.1.g05236 I 0.768
ASU_08112 Ascaris suum ASU_08112 N 0.766
EVEC_0000795701 Enterobius vermicularis EVEC_0000795701 I 0.766
EEL_0000889701 Elaeophora elaphi EEL_0000889701 N 0.766
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 I 0.765
PEQ_0001140301 Parascaris equorum PEQ_0001140301 N 0.760
BTMF_0000869901 Brugia timori BTMF_0000869901 N 0.760
TELCIR_00311 Teladorsagia circumcincta TELCIR_00311 I 0.760
L893_g1041 Steinernema glaseri L893_g1041 I 0.760
NECAME_04524 Necator americanus NECAME_04524 I 0.760
L889_g29910 Steinernema feltiae L889_g29910 I 0.760
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.760
ENSMEUG00000011758 Macropus eugenii ENSMEUG00000011758 I 0.758
ENSTNIG00000013141 Tetraodon nigroviridis ENSTNIG00000013141 I 0.754
TASK_0000210301 Taenia asiatica TASK_0000210301 I 0.752
nRc.2.0.1.g30341 Romanomermis culicivorax nRc.2.0.1.g30341 I 0.752
TTAC_0000709401 Hydatigera taeniaeformis TTAC_0000709401 I 0.752
TsM_000804100 Taenia solium TsM_000804100 I 0.752
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.750
AALB001179 Anopheles albimanus AALB001179 I 0.743
PAX8 Vicugna pacos ENSVPAG00000003973 I 0.741
HDID_0000853801 Hymenolepis diminuta HDID_0000853801 N 0.738
SMTD_0001015101 Schistosoma mattheei SMTD_0001015101 N 0.736
HmN_000735200 Hymenolepis microstoma HmN_000735200 N 0.736
BGLB002028 Biomphalaria glabrata BGLB002028 I 0.734
scaffold478-EXSNAP2012.12 Pristionchus exspectatus scaffold478-EXSNAP2012.12 I 0.728
ECANG7_07793 Echinococcus canadensis ECANG7_07793 I 0.728
EmuJ_000389800 Echinococcus multilocularis EmuJ_000389800 I 0.728
Ppa-vab-3 Pristionchus pacificus PPA03442 I 0.728
CBG04481 Caenorhabditis briggsae CBG04481 I 0.728
LCUP015671 Lucilia cuprina LCUP015671 N 0.727
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf10496-processed-gene-0.3 N 0.726
HPBE_0000479901 Heligmosomoides bakeri HPBE_0000479901 I 0.725
AARA010781 Anopheles arabiensis AARA010781 I 0.724
ENSACAG00000011033 Anolis carolinensis ENSACAG00000011033 I 0.721
Pax5 Dipodomys ordii ENSDORG00000015818 I 0.719
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.718
ENSPFOG00000023634 Poecilia formosa ENSPFOG00000023634 N 0.716
Sjc_0077510 Schistosoma japonicum Sjc_0077510 I 0.714
ENSGMOG00000012561 Gadus morhua ENSGMOG00000012561 I 0.712
CGI_10024166 Crassostrea gigas CGI_10024166 I 0.712
ENSXMAG00000012680 Xiphophorus maculatus ENSXMAG00000012680 I 0.712
pax2a Danio rerio ENSDARG00000028148 I 0.712
ENSPFOG00000013202 Poecilia formosa ENSPFOG00000013202 I 0.712
ENSPFOG00000011719 Poecilia formosa ENSPFOG00000011719 I 0.712
pax2a Gasterosteus aculeatus ENSGACG00000008391 I 0.712
SPU_014539 Strongylocentrotus purpuratus SPU_014539 I 0.712
pax2a Takifugu rubripes ENSTRUG00000008891 I 0.712
ENSONIG00000018496 Oreochromis niloticus ENSONIG00000018496 I 0.712
pax5 Takifugu rubripes ENSTRUG00000003227 I 0.712
pax5 Tetraodon nigroviridis ENSTNIG00000005085 I 0.712
pax5 Danio rerio ENSDARG00000037383 I 0.712
MCINX012239 Melitaea cinxia MCINX012239 I 0.711
Ogr18043 Ophisaurus gracilis Ogr18043 I 0.710
CpipJ_CPIJ009206 Culex pipiens CpipJ_CPIJ009206 I 0.707
CPIJ009206 Culex quinquefasciatus CPIJ009206 I 0.707
ADIR011362 Anopheles dirus ADIR011362 I 0.705
AEPI004837 Anopheles epiroticus AEPI004837 I 0.705
Pax6 Dipodomys ordii ENSDORG00000000254 N 0.705
LotgiG135549 Lottia gigantea LotgiG135549 I 0.705
KGM_12316 Danaus plexippus KGM_12316 I 0.705
Ocbimv22007526m.g Octopus bimaculoides Ocbimv22007526m.g I 0.705
pax2b Gasterosteus aculeatus ENSGACG00000002432 I 0.704
PAX5 Homo sapiens ENSG00000196092 D 0.704
pax2.L Xenopus laevis XB-GENE-486805 I 0.704
ENSAMEG00000010127 Ailuropoda melanoleuca ENSAMEG00000010127 I 0.704
pax5 Gasterosteus aculeatus ENSGACG00000016112 I 0.704
Pax5B Gallus gallus ENSGALG00000016431 D 0.704
PAX5 Loxodonta africana ENSLAFG00000028851 I 0.704
PAX5 Microcebus murinus ENSMICG00000017679 I 0.704
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.704
ACYPI000633 Acyrthosiphon pisum ACYPI000633 I 0.704
ENSAMXG00000012274 Astyanax mexicanus ENSAMXG00000012274 I 0.704
PAX5 Gorilla gorilla ENSGGOG00000003633 I 0.704
Pax-2 Gallus gallus ENSGALG00000005689 I 0.704
PAX5 Bos taurus ENSBTAG00000012498 I 0.704
PAX5 Equus caballus ENSECAG00000000551 I 0.704
PAX5 Choloepus hoffmanni ENSCHOG00000003521 I 0.704
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.704
PAX5 Cavia porcellus ENSCPOG00000009987 I 0.704
pax2b Danio rerio ENSDARG00000032578 D 0.704
ENSCSAG00000010751 Chlorocebus sabaeus ENSCSAG00000010751 I 0.704
PAX5 Erinaceus europaeus ENSEEUG00000012531 I 0.704
PAX5 Echinops telfairi ENSETEG00000002360 I 0.704
L889_g28670 Steinernema feltiae L889_g28670 I 0.704
PAX5 Myotis lucifugus ENSMLUG00000012652 I 0.704
PAX5 Felis catus ENSFCAG00000001628 I 0.704
ENSFALG00000012983 Ficedula albicollis ENSFALG00000012983 I 0.704
L893_g8856 Steinernema glaseri L893_g8856 I 0.704
PAX5 Canis familiaris ENSCAFG00000002357 I 0.704
L596_g7168 Steinernema carpocapsae L596_g7168 I 0.704
ENSONIG00000016065 Oreochromis niloticus ENSONIG00000016065 I 0.704
Gfo_R013093 Geospiza fortis Gfo_R013093 I 0.704
ENSP00000350844 Macaca fascicularis ENSP00000350844 I 0.704
ENSP00000350844-D1 Bos grunniens ENSP00000350844-D1 I 0.704
Myotis_brandtii_PAX5_10017827 Myotis brandtii Myotis_brandtii_PAX5_10017827 I 0.704
Pvit_15554 Pogona vitticeps Pvit_15554 I 0.704
PAX5 Monodelphis domestica ENSMODG00000002720 I 0.704
Sakowv30025789m.g Saccoglossus kowalevskii Sakowv30025789m.g I 0.704
PAX5 Pan troglodytes ENSPTRG00000020936 I 0.704
Brh_R001926 Buceros rhinoceros Brh_R001926 I 0.704
Afo_R005136 Aptenodytes forsteri Afo_R005136 I 0.704
PAX5 Taeniopygia guttata ENSTGUG00000007215 I 0.704
pax2b Takifugu rubripes ENSTRUG00000011987 I 0.704
ENSTSYG00000001117 Tarsius syrichta ENSTSYG00000001117 I 0.704
ENSSTOG00000024354 Ictidomys tridecemlineatus ENSSTOG00000024354 I 0.704
ENSSSCG00000005345 Sus scrofa ENSSSCG00000005345 I 0.704
Aan_R002178 Calypte anna Aan_R002178 I 0.704
PAX5 Pteropus vampyrus ENSPVAG00000000054 I 0.704
Pax5 Rattus norvegicus ENSRNOG00000024729 I 0.704
PAX2 Homo sapiens ENSG00000075891 D 0.704
ENSPPYG00000019064 Pongo abelii ENSPPYG00000019064 I 0.704
PAX5 Oryctolagus cuniculus ENSOCUG00000012281 I 0.704
ENSPFOG00000003702 Poecilia formosa ENSPFOG00000003702 I 0.704
ENSONIG00000008952 Oreochromis niloticus ENSONIG00000008952 I 0.704
ENSOARG00000011518 Ovis aries ENSOARG00000011518 I 0.704
PAX5 Ornithorhynchus anatinus ENSOANG00000007579 I 0.704
ENSMPUG00000006012 Mustela putorius furo ENSMPUG00000006012 I 0.704
Pax5 Mus musculus ENSMUSG00000014030 D 0.704
ENSNLEG00000003664 Nomascus leucogenys ENSNLEG00000003664 I 0.704
ENSXMAG00000003038 Xiphophorus maculatus ENSXMAG00000003038 I 0.704
ENSOGAG00000004773 Otolemur garnettii ENSOGAG00000004773 I 0.704
ENSPANG00000025475 Papio anubis ENSPANG00000025475 I 0.704
PAX5 Procavia capensis ENSPCAG00000004660 I 0.704
pax2 Xenopus tropicalis XB-GENE-486801 D 0.704
XP_002935920 Xenopus tropicalis XP_002935920 I 0.704
PAX5 Ochotona princeps ENSOPRG00000000734 I 0.704
pax5 Oryzias latipes ENSORLG00000005326 I 0.704
HelroG124549 Helobdella robusta HelroG124549 I 0.702
BGIBMGA013358 Bombyx mori BGIBMGA013358 I 0.702
CapteG119889 Capitella teleta CapteG119889 I 0.702
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.702
PAX8 Microcebus murinus ENSMICG00000003265 I 0.702
PAX8 Ochotona princeps ENSOPRG00000012910 I 0.702
AQUA004184 Anopheles quadriannulatus AQUA004184 I 0.701