CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CLEC006620
(
Cimex lectularius
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
CLEC006620
T312226_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.903
0.903
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.903
0.903
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.903
0.903
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR
YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.792
0.792
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.792
0.792
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN
NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.750
0.750
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.750
0.750
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.750
0.750
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.750
0.750
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.750
0.750
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.750
0.750
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.750
0.750
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.750
0.750
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG
CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.750
0.750
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.750
0.750
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.750
0.750
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.750
0.750
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.750
0.750
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.750
0.750
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.750
0.750
PAX5
M11210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.750
0.750
PAX5
M11211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.750
0.750
PAX5
M11212_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.750
0.750
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN
NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.736
0.736
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM
KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.736
0.736
PAX8
M11205_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.736
0.736
PAX8
M11206_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.736
0.736
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN
NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.736
0.736
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLEC006620-PA
Paired box
2
73
HNFSFRYYETGSFKAGVIGGSKPKVATAPVVDAIANYKRENPTMFAWEIRDRLLAEGICSQDNVPSVSSINR
Links
Other
Paired box
family TFs
Other
Cimex lectularius
TFs
160 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HHAL006987-PA
Halyomorpha halys
HHAL006987-PA
I
0.931
PHUM596300
Pediculus humanus
PHUM596300
I
0.917
spa-sv
Drosophila pseudoobscura
FBgn0249275
I
0.917
LLOJ002076
Lutzomyia longipalpis
LLOJ002076
I
0.917
RPRC001909
Rhodnius prolixus
RPRC001909
I
0.917
MESCA003563
Megaselia scalaris
MESCA003563
I
0.917
GH23966
Drosophila grimshawi
FBgn0131423
I
0.917
GK13586
Drosophila willistoni
FBgn0215594
I
0.917
YQE_12361
Dendroctonus ponderosae
YQE_12361
I
0.917
GJ13730
Drosophila virilis
FBgn0200951
I
0.917
GI14046
Drosophila mojavensis
FBgn0136800
I
0.917
GL18401
Drosophila persimilis
FBgn0156002
I
0.917
NV16807
Nasonia vitripennis
NV16807
I
0.903
SINV11533
Solenopsis invicta
SINV11533
I
0.903
ACEP12359
Atta cephalotes
ACEP12359
I
0.903
Hsal_05017--XP_001122481.1_APIME
Harpegnathos saltator
Hsal_05017--XP_001122481.1_APIME
I
0.903
GF20618
Drosophila ananassae
FBgn0097624
I
0.889
GM13025
Drosophila sechellia
FBgn0167956
I
0.875
DAPPUDRAFT_311028
Daphnia pulex
DAPPUDRAFT_311028
I
0.861
AFAF010901
Anopheles farauti
AFAF010901
I
0.819
ADIR000964
Anopheles dirus
ADIR000964
I
0.819
ACHR009800
Anopheles christyi
ACHR009800
I
0.806
ACUA027429
Anopheles culicifacies
ACUA027429
I
0.806
AMEC016969
Anopheles melas
AMEC016969
I
0.806
AFUN011579
Anopheles funestus
AFUN011579
I
0.806
AGAP000057
Anopheles gambiae
AGAP000057
I
0.806
ASTEI06196
Anopheles stephensi
ASTEI06196
I
0.806
ASIS021176
Anopheles sinensis
ASIS021176
I
0.806
AMAM018366
Anopheles maculatus
AMAM018366
I
0.806
AMEM003247
Anopheles merus
AMEM003247
I
0.806
AMIN002123
Anopheles minimus
AMIN002123
I
0.806
D917_02818
Trichinella nativa
D917_02818
I
0.797
Pax-2
Gallus gallus
ENSGALG00000005689
I
0.792
ENSGMOG00000000463
Gadus morhua
ENSGMOG00000000463
I
0.792
tetur29g01000
Tetranychus urticae
tetur29g01000
I
0.792
HelroG124549
Helobdella robusta
HelroG124549
I
0.792
PAX2
Homo sapiens
ENSG00000075891
D
0.792
Ogr18043
Ophisaurus gracilis
Ogr18043
I
0.792
ENSACAG00000011033
Anolis carolinensis
ENSACAG00000011033
I
0.792
pax2.L
Xenopus laevis
XB-GENE-486805
I
0.792
pax2
Xenopus tropicalis
XB-GENE-486801
D
0.792
pax2b
Danio rerio
ENSDARG00000032578
D
0.792
pax8
Xenopus tropicalis
XB-GENE-483693
I
0.781
AATE007772
Anopheles atroparvus
AATE007772
I
0.781
ENSPSIG00000012152
Pelodiscus sinensis
ENSPSIG00000012152
I
0.779
pax2a
Tetraodon nigroviridis
ENSTNIG00000008644
I
0.778
ENSOANG00000029256
Ornithorhynchus anatinus
ENSOANG00000029256
I
0.778
ENSPFOG00000003702
Poecilia formosa
ENSPFOG00000003702
I
0.778
ENSONIG00000016065
Oreochromis niloticus
ENSONIG00000016065
I
0.778
ENSAMXG00000005158
Astyanax mexicanus
ENSAMXG00000005158
I
0.778
pax2b
Oryzias latipes
ENSORLG00000009321
I
0.778
ENSONIG00000018496
Oreochromis niloticus
ENSONIG00000018496
I
0.778
pax8
Tetraodon nigroviridis
ENSTNIG00000009029
I
0.778
EFV60539
Trichinella spiralis
EFV60539
I
0.778
Pax2
Rattus norvegicus
ENSRNOG00000014253
I
0.778
pax2a
Takifugu rubripes
ENSTRUG00000008891
I
0.778
pax2b
Gasterosteus aculeatus
ENSGACG00000002432
I
0.778
pax2a
Gasterosteus aculeatus
ENSGACG00000008391
I
0.778
ENSPFOG00000013202
Poecilia formosa
ENSPFOG00000013202
I
0.778
ENSLOCG00000012825
Lepisosteus oculatus
ENSLOCG00000012825
I
0.764
ENSPFOG00000019830
Poecilia formosa
ENSPFOG00000019830
I
0.764
ENSTNIG00000005391
Tetraodon nigroviridis
ENSTNIG00000005391
I
0.764
pax8
Oryzias latipes
ENSORLG00000007225
I
0.764
PAX5
Anolis carolinensis
ENSACAG00000011646
I
0.764
pax8
Danio rerio
ENSDARG00000015879
I
0.764
ENSAMXG00000009227
Astyanax mexicanus
ENSAMXG00000009227
I
0.764
pax2b
Takifugu rubripes
ENSTRUG00000011987
I
0.764
ENSLACG00000013159
Latimeria chalumnae
ENSLACG00000013159
I
0.764
SPU_014539
Strongylocentrotus purpuratus
SPU_014539
I
0.764
pax5.L
Xenopus laevis
XB-GENE-865318
I
0.764
pax8
Gasterosteus aculeatus
ENSGACG00000016747
I
0.764
pax2a
Danio rerio
ENSDARG00000028148
I
0.764
ENSONIG00000000205
Oreochromis niloticus
ENSONIG00000000205
I
0.764
Pax8
Rattus norvegicus
ENSRNOG00000026203
D
0.757
ENSXMAG00000012680
Xiphophorus maculatus
ENSXMAG00000012680
I
0.750
ENSTSYG00000001117
Tarsius syrichta
ENSTSYG00000001117
I
0.750
Gfo_R013093
Geospiza fortis
Gfo_R013093
I
0.750
pax5
Takifugu rubripes
ENSTRUG00000003227
I
0.750
Myotis_brandtii_PAX5_10017827
Myotis brandtii
Myotis_brandtii_PAX5_10017827
I
0.750
Pvit_15554
Pogona vitticeps
Pvit_15554
I
0.750
XP_002935920
Xenopus tropicalis
XP_002935920
I
0.750
ENSP00000350844
Macaca fascicularis
ENSP00000350844
I
0.750
ENSP00000350844-D1
Bos grunniens
ENSP00000350844-D1
I
0.750
Aan_R002178
Calypte anna
Aan_R002178
I
0.750
Afo_R005136
Aptenodytes forsteri
Afo_R005136
I
0.750
Brh_R001926
Buceros rhinoceros
Brh_R001926
I
0.750
LotgiG135549
Lottia gigantea
LotgiG135549
I
0.750
PAX5
Pteropus vampyrus
ENSPVAG00000000054
I
0.750
pax5
Tetraodon nigroviridis
ENSTNIG00000005085
I
0.750
PAX5
Homo sapiens
ENSG00000196092
D
0.750
PAX5
Felis catus
ENSFCAG00000001628
I
0.750
ENSFALG00000012983
Ficedula albicollis
ENSFALG00000012983
I
0.750
PAX5
Gorilla gorilla
ENSGGOG00000003633
I
0.750
PAX5
Loxodonta africana
ENSLAFG00000028851
I
0.750
PAX5
Monodelphis domestica
ENSMODG00000002720
I
0.750
PAX5
Myotis lucifugus
ENSMLUG00000012652
I
0.750
PAX5
Microcebus murinus
ENSMICG00000017679
I
0.750
ENSLOCG00000015261
Lepisosteus oculatus
ENSLOCG00000015261
I
0.750
PAX5
Echinops telfairi
ENSETEG00000002360
I
0.750
PAX5
Erinaceus europaeus
ENSEEUG00000012531
I
0.750
PAX5
Choloepus hoffmanni
ENSCHOG00000003521
I
0.750
PAX5
Canis familiaris
ENSCAFG00000002357
I
0.750
PAX5
Bos taurus
ENSBTAG00000012498
I
0.750
ENSAMEG00000010127
Ailuropoda melanoleuca
ENSAMEG00000010127
I
0.750
PAX5
Callithrix jacchus
ENSCJAG00000010379
I
0.750
PAX5
Cavia porcellus
ENSCPOG00000009987
I
0.750
PAX5
Equus caballus
ENSECAG00000000551
I
0.750
pax5
Danio rerio
ENSDARG00000037383
I
0.750
ENSCSAG00000010751
Chlorocebus sabaeus
ENSCSAG00000010751
I
0.750
ENSMPUG00000006012
Mustela putorius furo
ENSMPUG00000006012
I
0.750
Pax5B
Gallus gallus
ENSGALG00000016431
D
0.750
ENSPPYG00000019064
Pongo abelii
ENSPPYG00000019064
I
0.750
PAX5
Procavia capensis
ENSPCAG00000004660
I
0.750
ENSPANG00000025475
Papio anubis
ENSPANG00000025475
I
0.750
PAX5
Ochotona princeps
ENSOPRG00000000734
I
0.750
PAX5
Pan troglodytes
ENSPTRG00000020936
I
0.750
Pax5
Rattus norvegicus
ENSRNOG00000024729
I
0.750
PAX5
Taeniopygia guttata
ENSTGUG00000007215
I
0.750
ENSSTOG00000024354
Ictidomys tridecemlineatus
ENSSTOG00000024354
I
0.750
ENSSSCG00000005345
Sus scrofa
ENSSSCG00000005345
I
0.750
ENSOGAG00000004773
Otolemur garnettii
ENSOGAG00000004773
I
0.750
ENSPFOG00000011719
Poecilia formosa
ENSPFOG00000011719
I
0.750
PAX5
Ornithorhynchus anatinus
ENSOANG00000007579
I
0.750
Pax5
Mus musculus
ENSMUSG00000014030
D
0.750
ENSOARG00000011518
Ovis aries
ENSOARG00000011518
I
0.750
ENSNLEG00000003664
Nomascus leucogenys
ENSNLEG00000003664
I
0.750
PAX5
Oryctolagus cuniculus
ENSOCUG00000012281
I
0.750
Pax8
Dipodomys ordii
ENSDORG00000002606
I
0.736
pax5
Gasterosteus aculeatus
ENSGACG00000016112
I
0.736
Alligator_sinensis_CCG013279.1
Alligator sinensis
Alligator_sinensis_CCG013279.1
I
0.736
Pax5
Dipodomys ordii
ENSDORG00000015818
I
0.736
PAX8
Felis catus
ENSFCAG00000009580
I
0.736
pax2/5/8-b
Ciona intestinalis
ENSCING00000005977
I
0.736
DICVIV_04707
Dictyocaulus viviparus
DICVIV_04707
I
0.722
SROB_0000566701
Schistosoma rodhaini
SROB_0000566701
I
0.722
Smp_142940
Schistosoma mansoni
Smp_142940
I
0.722
HCOI01205400
Haemonchus contortus
HCOI01205400
I
0.722
L596_g7168
Steinernema carpocapsae
L596_g7168
I
0.722
L898_g18055
Steinernema monticolum
L898_g18055
I
0.722
SMRZ_0001886701
Schistosoma margrebowiei
SMRZ_0001886701
I
0.722
L889_g28670
Steinernema feltiae
L889_g28670
I
0.722
SPU_018351
Strongylocentrotus purpuratus
SPU_018351
I
0.722
BGLB002026
Biomphalaria glabrata
BGLB002026
N
0.722
PAX8
Pan troglodytes
ENSPTRG00000012380
I
0.722
ENSCSAVG00000001640
Ciona savignyi
ENSCSAVG00000001640
I
0.722
TELCIR_10899
Teladorsagia circumcincta
TELCIR_10899
I
0.722
PAX8
Equus caballus
ENSECAG00000009244
I
0.722
SCUD_0002110701
Schistosoma curassoni
SCUD_0002110701
I
0.722
ENSLACG00000003762
Latimeria chalumnae
ENSLACG00000003762
I
0.722
PAX8
Ochotona princeps
ENSOPRG00000012910
I
0.722
PAX8
Microcebus murinus
ENSMICG00000003265
I
0.722
SPER_0000498301
Spirometra erinaceieuropaei
SPER_0000498301
I
0.708
SSLN_0001596201
Schistocephalus solidus
SSLN_0001596201
I
0.708
ENSSARG00000014324
Sorex araneus
ENSSARG00000014324
I
0.708
pax8.L
Xenopus laevis
XB-GENE-865008
I
0.708
Sjc_0065980
Schistosoma japonicum
Sjc_0065980
I
0.708
csin100153
Clonorchis sinensis
csin100153
I
0.708
L892_g26455
Steinernema scapterisci
L892_g26455
I
0.708
L893_g8856
Steinernema glaseri
L893_g8856
I
0.708
nRc.2.0.1.g01878
Romanomermis culicivorax
nRc.2.0.1.g01878
I
0.708