SNAPOd2T00016386001 (Oikopleura dioica)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 SNAPOd2T00016386001 T312270_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN

NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.817 0.817
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN

NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.817 0.817
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00016386001 Paired box 21 80

Links

Other Paired box family TFs
Other Oikopleura dioica TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSORLG00000019389 Oryzias latipes ENSORLG00000019389 I 0.833
Cflo_06473--XP_394848.3_APIME Camponotus floridanus Cflo_06473--XP_394848.3_APIME I 0.833
PAX7 Homo sapiens ENSG00000009709 D 0.817
Pax7 Dipodomys ordii ENSDORG00000011854 I 0.817
Alligator_sinensis_CCG006492.1 Alligator sinensis Alligator_sinensis_CCG006492.1 I 0.817
AFUN002668 Anopheles funestus AFUN002668 I 0.817
PAX7 Procavia capensis ENSPCAG00000005303 I 0.817
ENSMODG00000025571 Monodelphis domestica ENSMODG00000025571 I 0.817
DAPPUDRAFT_65647 Daphnia pulex DAPPUDRAFT_65647 I 0.800
KGM_02686 Danaus plexippus KGM_02686 I 0.774
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.727
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.727
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.727
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.727
Hba_09392 Heterorhabditis bacteriophora Hba_09392 N 0.717
nOo.2.0.1.g04237 Onchocerca ochengi nOo.2.0.1.g04237 N 0.717
PEQ_0000701201 Parascaris equorum PEQ_0000701201 I 0.717
EEL_0000119101 Elaeophora elaphi EEL_0000119101 N 0.717
nLs.2.1.2.g02363 Litomosoides sigmodontis nLs.2.1.2.g02363 N 0.717
BTMF_0001220301 Brugia timori BTMF_0001220301 N 0.717
WBGene00247363 Onchocerca volvulus WBGene00247363 N 0.717
LOAG_04282 Loa loa LOAG_04282 N 0.717
AMAM016481 Anopheles maculatus AMAM016481 I 0.717
YQE_12759 Dendroctonus ponderosae YQE_12759 N 0.717
TELCIR_10899 Teladorsagia circumcincta TELCIR_10899 I 0.700
NEMVEDRAFT_v1g119149 Nematostella vectensis NEMVEDRAFT_v1g119149 I 0.700
MhA1_Contig2347.frz3.gene2 Meloidogyne hapla MhA1_Contig2347.frz3.gene2 N 0.700
EVEC_0000839201 Enterobius vermicularis EVEC_0000839201 N 0.700
HCOI01205400 Haemonchus contortus HCOI01205400 I 0.700
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I 0.700
DICVIV_04707 Dictyocaulus viviparus DICVIV_04707 I 0.700