AATE007772 (Anopheles atroparvus)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 AATE007772 T312359_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.750 0.750
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.750 0.750
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.750 0.750
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.750 0.750
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.750 0.750
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.719 0.719
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.719 0.719
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.719 0.719
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.719 0.719
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AATE007772-PA Paired box 1 32

Links

Other Paired box family TFs
Other Anopheles atroparvus TFs

171 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA032901 Oryza indica BGIOSGA032901 N 0.000
OS10G0413700 Oryza sativa OS10G0413700 N 0.000
ORUFI10G10360 Oryza rufipogon ORUFI10G10360 N 0.000
ORUFI10G10340 Oryza rufipogon ORUFI10G10340 N 0.000
OPUNC07G15160 Oryza punctata OPUNC07G15160 N 0.000
ONIVA10G09250 Oryza nivara ONIVA10G09250 N 0.000
OMERI10G07220 Oryza meridionalis OMERI10G07220 N 0.000
OLONG_014467 Oryza longistaminata OLONG_014467 N 0.000
OBART10G09860 Oryza barthii OBART10G09860 N 0.000
OBART10G09840 Oryza barthii OBART10G09840 N 0.000
OB10G17690 Oryza brachyantha OB10G17690 N 0.000
BGIOSGA032907 Oryza indica BGIOSGA032907 N 0.000
OS10G0414000 Oryza sativa OS10G0414000 N 0.000