CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AFAF004706
(
Anopheles farauti
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
AFAF004706
T312393_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX7
M00346_2.00
Homo sapiens
NGTYAYGSHN
NDSCRTRACN
PBM
Barrera et al.(2016)
PAX7_REF
0.721
0.721
PAX7
M00345_2.00
Homo sapiens
NSGTCACGSN
NSCGTGACSN
PBM
Barrera et al.(2016)
PAX7_P112L
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AFAF004706-PA
Paired box
22
143
GQGRVNQLGGVFINGRPLPNHIRLKIVEMAASGVRPCVISRQLRVSHGCVSKILNRYQETGSIRPGVIGGSKPKVATPEVEARIEEMKKMNPGIFSWEIREKLIKVMFDTSENKQGIICEMF
Links
Other
Paired box
family TFs
Other
Anopheles farauti
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy