CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
BGLB007764
(
Biomphalaria glabrata
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
BGLB007764
T312446_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR
YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.730
0.730
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.730
0.730
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM
KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.721
0.721
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS
SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.721
0.721
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN
NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.721
0.721
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN
NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.713
0.713
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.713
0.713
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.713
0.713
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.713
0.713
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.713
0.713
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.713
0.713
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.713
0.713
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.713
0.713
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG
CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.713
0.713
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.713
0.713
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.713
0.713
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.713
0.713
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.713
0.713
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.713
0.713
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.713
0.713
PAX5
M11210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.713
0.713
PAX5
M11211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.713
0.713
PAX5
M11212_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.713
0.713
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGLB007764-PA
Paired box
9
130
GHSGVNQLGGVFVNGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATNDVVGRIAHYKRECPSIFAWEIRDRLLSEGICNQENIPSPIAVDA
Links
Other
Paired box
family TFs
Other
Biomphalaria glabrata
TFs
183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
pax6a
Danio rerio
ENSDARG00000103379
I
0.986
pax6b
Danio rerio
ENSDARG00000045936
I
0.969
DAPPUDRAFT_38922
Daphnia pulex
DAPPUDRAFT_38922
I
0.963
PAX6
Homo sapiens
ENSG00000007372
D
0.963
LCUP013028
Lucilia cuprina
LCUP013028
I
0.945
Pax6
Mus musculus
ENSMUSG00000027168
D
0.929
LCUP015670
Lucilia cuprina
LCUP015670
I
0.929
AAC60302
Xenopus laevis
AAC60302
I
0.926
SVUK_0001011501
Strongylus vulgaris
SVUK_0001011501
I
0.917
ANCCAN_00243
Ancylostoma caninum
ANCCAN_00243
I
0.917
SCUD_0000535601
Schistosoma curassoni
SCUD_0000535601
I
0.890
SPU_006786
Strongylocentrotus purpuratus
SPU_006786
I
0.880
HMEL009702
Heliconius melpomene
HMEL009702
I
0.876
D915_05709
Fasciola hepatica
D915_05709
I
0.869
KGM_02181
Danaus plexippus
KGM_02181
I
0.867
ACOC_0000178201
Angiostrongylus costaricensis
ACOC_0000178201
I
0.861
ACAC_0001290301
Angiostrongylus cantonensis
ACAC_0001290301
I
0.861
RPRC003362
Rhodnius prolixus
RPRC003362
I
0.860
LDEC008984
Leptinotarsa decemlineata
LDEC008984
I
0.858
pax6b
Gasterosteus aculeatus
ENSGACG00000016030
I
0.856
Ocbimv22011111m.g
Octopus bimaculoides
Ocbimv22011111m.g
I
0.856
ENSTSYG00000008085
Tarsius syrichta
ENSTSYG00000008085
I
0.855
PAX5
Tursiops truncatus
ENSTTRG00000006049
I
0.855
PAX5
Tupaia belangeri
ENSTBEG00000007983
I
0.855
RPRC001429
Rhodnius prolixus
RPRC001429
I
0.854
PXEA_0002614201
Protopolystoma xenopodis
PXEA_0002614201
I
0.853
ECPE_0001376401
Echinostoma caproni
ECPE_0001376401
I
0.847
BGIBMGA009545
Bombyx mori
BGIBMGA009545
I
0.841
A_03128
Schistosoma haematobium
A_03128
I
0.840
SBAD_0001213701
Soboliphyme baturini
SBAD_0001213701
I
0.839
CLEC008846
Cimex lectularius
CLEC008846
I
0.839
CLEC006621
Cimex lectularius
CLEC006621
I
0.839
DAPPUDRAFT_122807
Daphnia pulex
DAPPUDRAFT_122807
I
0.839
YQE_05107
Dendroctonus ponderosae
YQE_05107
I
0.837
ECPE_0000273501
Echinostoma caproni
ECPE_0000273501
I
0.836
SINV17241
Solenopsis invicta
SINV17241
I
0.835
ANCCEY_08417
Ancylostoma ceylanicum
ANCCEY_08417
I
0.833
Sjc_0004220
Schistosoma japonicum
Sjc_0004220
I
0.832
ACEP24464
Atta cephalotes
ACEP24464
I
0.832
Cflo_05394--XP_001120031.1_APIME
Camponotus floridanus
Cflo_05394--XP_001120031.1_APIME
I
0.832
SSLN_0001115101
Schistocephalus solidus
SSLN_0001115101
I
0.831
CLEC008733
Cimex lectularius
CLEC008733
I
0.830
PHUM217120
Pediculus humanus
PHUM217120
I
0.824
BGIBMGA009432
Bombyx mori
BGIBMGA009432
I
0.824
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0
I
0.824
PXEA_0001769401
Protopolystoma xenopodis
PXEA_0001769401
N
0.818
ACEP20912
Atta cephalotes
ACEP20912
N
0.816
SPER_0000208501
Spirometra erinaceieuropaei
SPER_0000208501
N
0.816
AATE019182
Anopheles atroparvus
AATE019182
I
0.803
DILT_0000606101
Diphyllobothrium latum
DILT_0000606101
N
0.800
TRE_0000921601
Trichobilharzia regenti
TRE_0000921601
I
0.800
OESDEN_18680
Oesophagostomum dentatum
OESDEN_18680
I
0.795
DILT_0000442801
Diphyllobothrium latum
DILT_0000442801
I
0.792
ACOM023323
Anopheles coluzzii
ACOM023323
I
0.790
ENSMEUG00000011758
Macropus eugenii
ENSMEUG00000011758
I
0.788
HMEL002395
Heliconius melpomene
HMEL002395
N
0.787
AMAM010937
Anopheles maculatus
AMAM010937
I
0.784
nRc.2.0.1.g00894
Romanomermis culicivorax
nRc.2.0.1.g00894
I
0.784
ENSCSAVG00000007987
Ciona savignyi
ENSCSAVG00000007987
I
0.779
PAX8
Vicugna pacos
ENSVPAG00000003973
I
0.778
ENSTNIG00000013141
Tetraodon nigroviridis
ENSTNIG00000013141
I
0.772
ANCDUO_03668
Ancylostoma duodenale
ANCDUO_03668
N
0.772
AALB001179
Anopheles albimanus
AALB001179
I
0.770
L596_g12356
Steinernema carpocapsae
L596_g12356
I
0.770
DME_0000186001
Dracunculus medinensis
DME_0000186001
N
0.769
OFLC_0001383501
Onchocerca flexuosa
OFLC_0001383501
I
0.769
NECAME_04524
Necator americanus
NECAME_04524
I
0.768
TELCIR_00311
Teladorsagia circumcincta
TELCIR_00311
I
0.768
WUBG_13045
Wuchereria bancrofti
WUBG_13045
I
0.762
HDID_0000853801
Hymenolepis diminuta
HDID_0000853801
N
0.762
MCINX012239
Melitaea cinxia
MCINX012239
I
0.760
L889_g29910
Steinernema feltiae
L889_g29910
I
0.760
TTAC_0000709401
Hydatigera taeniaeformis
TTAC_0000709401
I
0.760
LCUP015671
Lucilia cuprina
LCUP015671
N
0.758
EVEC_0000795701
Enterobius vermicularis
EVEC_0000795701
I
0.758
LOAG_04187
Loa loa
LOAG_04187
N
0.756
HPBE_0000479901
Heligmosomoides bakeri
HPBE_0000479901
I
0.754
TASK_0000210301
Taenia asiatica
TASK_0000210301
I
0.752
CBG04481
Caenorhabditis briggsae
CBG04481
I
0.752
ECANG7_07793
Echinococcus canadensis
ECANG7_07793
I
0.752
EmuJ_000389800
Echinococcus multilocularis
EmuJ_000389800
I
0.752
ASU_08112
Ascaris suum
ASU_08112
N
0.750
TCLT_0000192601
Thelazia callipaeda
TCLT_0000192601
N
0.750
Sjc_0077510
Schistosoma japonicum
Sjc_0077510
I
0.750
EEL_0000889701
Elaeophora elaphi
EEL_0000889701
N
0.750
AARA010781
Anopheles arabiensis
AARA010781
I
0.750
KGM_12316
Danaus plexippus
KGM_12316
I
0.746
L893_g1041
Steinernema glaseri
L893_g1041
I
0.744
SMTD_0001015101
Schistosoma mattheei
SMTD_0001015101
N
0.744
PEQ_0001140301
Parascaris equorum
PEQ_0001140301
N
0.744
ALUE_0000749601
Ascaris lumbricoides
ALUE_0000749601
N
0.744
HmN_000735200
Hymenolepis microstoma
HmN_000735200
N
0.744
nDi.2.2.2.g03678
Dirofilaria immitis
nDi.2.2.2.g03678
I
0.744
TsM_000804100
Taenia solium
TsM_000804100
I
0.744
BTMF_0000869901
Brugia timori
BTMF_0000869901
N
0.744
WBGene00241130
Onchocerca volvulus
WBGene00241130
I
0.744
nAv.1.0.1.g05236
Acanthocheilonema viteae
nAv.1.0.1.g05236
I
0.744
nOo.2.0.1.g04580
Onchocerca ochengi
nOo.2.0.1.g04580
I
0.744
nLs.2.1.2.g01338
Litomosoides sigmodontis
nLs.2.1.2.g01338
N
0.744
Bm14693
Brugia malayi
Bm14693
I
0.744
LCUP011945
Lucilia cuprina
LCUP011945
I
0.738
Ocbimv22007526m.g
Octopus bimaculoides
Ocbimv22007526m.g
I
0.738
scaffold478-EXSNAP2012.12
Pristionchus exspectatus
scaffold478-EXSNAP2012.12
I
0.736
Ppa-vab-3
Pristionchus pacificus
PPA03442
I
0.736
BGIBMGA013358
Bombyx mori
BGIBMGA013358
I
0.734
BGLB002028
Biomphalaria glabrata
BGLB002028
I
0.734
ENSONIG00000005161
Oreochromis niloticus
ENSONIG00000005161
I
0.733
ADIR011362
Anopheles dirus
ADIR011362
I
0.731
AEPI004837
Anopheles epiroticus
AEPI004837
I
0.731
ENSACAG00000011033
Anolis carolinensis
ENSACAG00000011033
I
0.730
ENSPFOG00000023634
Poecilia formosa
ENSPFOG00000023634
N
0.730
spa-sv
Drosophila pseudoobscura
FBgn0249275
I
0.730
GH23966
Drosophila grimshawi
FBgn0131423
I
0.730
GK13586
Drosophila willistoni
FBgn0215594
I
0.730
GJ13730
Drosophila virilis
FBgn0200951
I
0.730
GI14046
Drosophila mojavensis
FBgn0136800
I
0.730
YQE_12361
Dendroctonus ponderosae
YQE_12361
I
0.730
GL18401
Drosophila persimilis
FBgn0156002
I
0.730
MESCA003563
Megaselia scalaris
MESCA003563
I
0.730
HPLM_0000491501
Haemonchus placei
HPLM_0000491501
I
0.729
DAPPUDRAFT_311028
Daphnia pulex
DAPPUDRAFT_311028
I
0.728
nRc.2.0.1.g30341
Romanomermis culicivorax
nRc.2.0.1.g30341
I
0.728
AQUA004184
Anopheles quadriannulatus
AQUA004184
I
0.727
HelroG124549
Helobdella robusta
HelroG124549
I
0.727
CapteG119889
Capitella teleta
CapteG119889
I
0.726
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf10496-processed-gene-0.3
N
0.726
LDEC012767
Leptinotarsa decemlineata
LDEC012767
I
0.721
ACEP12359
Atta cephalotes
ACEP12359
I
0.721
ENSAMXG00000005158
Astyanax mexicanus
ENSAMXG00000005158
I
0.720
CPIJ009206
Culex quinquefasciatus
CPIJ009206
I
0.720
ANCCAN_01421
Ancylostoma caninum
ANCCAN_01421
I
0.720
CpipJ_CPIJ009206
Culex pipiens
CpipJ_CPIJ009206
I
0.720
Pax5
Dipodomys ordii
ENSDORG00000015818
I
0.719
PAX2
Loxodonta africana
ENSLAFG00000002388
I
0.718
Pax2
Rattus norvegicus
ENSRNOG00000014253
I
0.718
Ogr18043
Ophisaurus gracilis
Ogr18043
I
0.718
CLEC009745
Cimex lectularius
CLEC009745
I
0.716
HHAL001219-PA
Halyomorpha halys
HHAL001219-PA
I
0.716
SNAPOd2T00015306001
Oikopleura dioica
SNAPOd2T00015306001
N
0.714
Pax5
Mus musculus
ENSMUSG00000014030
D
0.714
ENSLACG00000013159
Latimeria chalumnae
ENSLACG00000013159
I
0.713
PAX2
Homo sapiens
ENSG00000075891
D
0.712
pax2.L
Xenopus laevis
XB-GENE-486805
I
0.712
ENSONIG00000016065
Oreochromis niloticus
ENSONIG00000016065
I
0.712
Pax-2
Gallus gallus
ENSGALG00000005689
I
0.712
pax2
Xenopus tropicalis
XB-GENE-486801
D
0.712
SPU_014539
Strongylocentrotus purpuratus
SPU_014539
I
0.712
pax2b
Danio rerio
ENSDARG00000032578
D
0.712
CGI_10024166
Crassostrea gigas
CGI_10024166
I
0.712
ENSPFOG00000003702
Poecilia formosa
ENSPFOG00000003702
I
0.712
SINV11533
Solenopsis invicta
SINV11533
I
0.710
DME_0000901001
Dracunculus medinensis
DME_0000901001
I
0.708
PAX9
Pteropus vampyrus
ENSPVAG00000003728
I
0.707
LotgiG135549
Lottia gigantea
LotgiG135549
I
0.705
TMUE_s0017010200
Trichuris muris
TMUE_s0017010200
I
0.704
TC003570
Tribolium castaneum
TC003570
I
0.704
ENSONIG00000018496
Oreochromis niloticus
ENSONIG00000018496
I
0.704
ENSLOCG00000005490
Lepisosteus oculatus
ENSLOCG00000005490
I
0.704
pax2b
Oryzias latipes
ENSORLG00000009321
I
0.704
ENSPFOG00000011719
Poecilia formosa
ENSPFOG00000011719
I
0.704
ENSPFOG00000013202
Poecilia formosa
ENSPFOG00000013202
I
0.704
ENSGMOG00000012561
Gadus morhua
ENSGMOG00000012561
I
0.704
ENSGMOG00000000463
Gadus morhua
ENSGMOG00000000463
I
0.704
EFV60539
Trichinella spiralis
EFV60539
I
0.704
ACYPI000633
Acyrthosiphon pisum
ACYPI000633
I
0.704
pax2a
Danio rerio
ENSDARG00000028148
I
0.704
pax5
Danio rerio
ENSDARG00000037383
I
0.704
pax2a
Gasterosteus aculeatus
ENSGACG00000008391
I
0.704
pax5
Tetraodon nigroviridis
ENSTNIG00000005085
I
0.704
pax5
Takifugu rubripes
ENSTRUG00000003227
I
0.704
GB53162
Apis mellifera
GB53162
I
0.704
GE14566
Drosophila yakuba
FBgn0232164
I
0.704
tetur29g01000
Tetranychus urticae
tetur29g01000
I
0.704
Cflo_02260--XP_001122481.1_APIME
Camponotus floridanus
Cflo_02260--XP_001122481.1_APIME
I
0.704
LLOJ002076
Lutzomyia longipalpis
LLOJ002076
I
0.704
D918_03581
Trichuris suis
D918_03581
I
0.704
GD24421
Drosophila simulans
FBgn0195757
I
0.704
ENSXMAG00000012680
Xiphophorus maculatus
ENSXMAG00000012680
I
0.704
sv
Drosophila melanogaster
FBgn0005561
D
0.704
GG16406
Drosophila erecta
FBgn0108638
I
0.704
GF20618
Drosophila ananassae
FBgn0097624
I
0.704
pax2a
Takifugu rubripes
ENSTRUG00000008891
I
0.704
RPRC001910
Rhodnius prolixus
RPRC001910
I
0.700