ANCCAN_00243 (Ancylostoma caninum)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00292 (PAX) IPR001523 ANCCAN_00243 T312489_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
pax2b
M02425_2.00
Danio rerio
HVNYSRNSCR

YGSNYSRNBD
PBM
Weirauch et al.(2014)
pTH8679
0.812 0.812
Pax5B
M01301_2.00
Gallus gallus
NSNDTNNNN

NNNNAHNSN
PBM
Lambert et al.(2019)
pTH9781
0.812 0.812
sv
M01302_2.00
Drosophila melanogaster
NNNSCRBRDM

KHYVYGSNNN
PBM
Lambert et al.(2019)
pTH9773
0.812 0.812
pax2
M02428_2.00
Xenopus tropicalis
NNNRNBCRNN

NNYGVNYNNN
PBM
Weirauch et al.(2014)
pTH8556
0.812 0.812
PAX5
M03443_2.00
Homo sapiens
RNBYANYSAWSCGTRACN

NGTYACGSWTSRNTRVNY
SELEX
Jolma et al.(2013)
PAX5_1
0.812 0.812
sv
M03949_2.00
Drosophila melanogaster
NBCRNYSAWGCGTGACS

SGTCACGCWTSRNYGVN
SELEX
Nitta et al.(2015)
sv_1
0.812 0.812
sv
M06438_2.00
Drosophila melanogaster
RNYSRDSCGTRACNN

NNGTYACGSHYSRNY
B1H
Zhu et al.(2011)
sv_SOLEXA_5_FBgn0005561
0.812 0.812
PAX5
M08160_2.00
Homo sapiens
RDGCGTGACCNN

NNGGTCACGCHY
ChIP-seq
Mathelier et al.(2014)
MA0014.3
0.812 0.812
PAX5
M07995_2.00
Homo sapiens
BCAVYSRDSCRKRRC

GYYMYGSHYSRBTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha
0.812 0.812
PAX5
M07996_2.00
Homo sapiens
BCASYSRDSCRTRAC

GTYAYGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha
0.812 0.812
PAX5
M07997_2.00
Homo sapiens
CASYSRDSCRKRACN

NGTYMYGSHYSRSTG
ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha
0.812 0.812
PAX5
M07998_2.00
Homo sapiens
BCASYSRDSCGKRRC

GYYMCGSHYSRSTGV
ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha
0.812 0.812
PAX5
M08227_2.00
Homo sapiens
BCANYSRDGCGTRAM

KTYACGCHYSRNTGV
ChIP-seq
Contrino et al.(2012)
Mv108
0.812 0.812
PAX5
M08228_2.00
Homo sapiens
AGCGTGRCYG

CRGYCACGCT
ChIP-seq
Contrino et al.(2012)
Mv109
0.812 0.812
PAX5
M09341_2.00
Homo sapiens
SNVDGNKCARCVRAGCRDGAC

GTCHYGCTYBGYTGMNCHBNS
Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A
0.812 0.812
Pax5
M09342_2.00
Mus musculus
VDRNBCAVYVRDSCRKRRM

KYYMYGSHYBRBTGVNYHB
Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A
0.812 0.812
PAX5
M09622_2.00
Homo sapiens
BCASYSRDSCRTGRMN

NKYCAYGSHYSRSTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1
0.812 0.812
PAX5
M09623_2.00
Homo sapiens
BCABNVRSCGTGAC

GTCACGSYBNVTGV
Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2
0.812 0.812
PAX5
M11208_2.00
Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB

VNDSYSKCYMYNCWNCVNTGMNYNNNGV
Transfac
Matys et al.(2006)
V$PAX5_01
0.812 0.812
PAX5
M11209_2.00
Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH

DBNRYBGTYMCGCTYNAVVHNHCHBDYB
Transfac
Matys et al.(2006)
V$PAX5_02
0.812 0.812
PAX5
M11210_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_06
0.812 0.812
PAX5
M11211_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_07
0.812 0.812
PAX5
M11212_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX5_Q6
0.812 0.812
pax-2
M00706_2.00
Caenorhabditis elegans
RMSCRTRACS

SGTYAYGSKY
PBM
Narasimhan et al.(2015)
pTH10794
0.750 0.750
egl-38
M02426_2.00
Caenorhabditis elegans
ACCGTGAYCAC

GTGRTCACGGT
PBM
Weirauch et al.(2014)
pTH8981
0.729 0.729
Poxn
M03946_2.00
Drosophila melanogaster
DGCGTGACSGTCACGSY

RSCGTGACSGTCACGCH
SELEX
Nitta et al.(2015)
Poxn_1
0.729 0.729
Poxn
M03947_2.00
Drosophila melanogaster
RSCGKGACSGTTMCGSW

WSCGKAACSGTCMCGSY
SELEX
Nitta et al.(2015)
Poxn_2
0.729 0.729
Poxn
M03948_2.00
Drosophila melanogaster
NCGTTCCGGAACGD

HCGTTCCGGAACGN
SELEX
Nitta et al.(2015)
Poxn_3
0.729 0.729
PAX8
M05685_2.00
Homo sapiens
NRNBYRNYSRWGCGTGACSN

NSGTCACGCWYSRNYRVNYN
SELEX
Yin et al.(2017)
PAX8_FL_HT-SELEX
0.729 0.729
Poxn
M06437_2.00
Drosophila melanogaster
RSCGTGACG

CGTCACGSY
B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130
0.729 0.729
Pax8
M09624_2.00
Rattus norvegicus
BCAGBCADSCRKGVM

KBCMYGSHTGVCTGV
Misc
Heinz et al.(2010)
Thyroid-Pax8_GSE26938
0.729 0.729
PAX8
M11205_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_01
0.729 0.729
PAX8
M11206_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX8_B
0.729 0.729
PAX8
M05686_2.00
Homo sapiens
NRNBCRNTSAWSCGYGACNN

NNGTCRCGSWTSANYGVNYN
SELEX
Yin et al.(2017)
PAX8_FL_Methyl-HT-SELEX
0.729 0.729
Poxm
M03944_2.00
Drosophila melanogaster
CAVTCAWGCGTGACR

YGTCACGCWTGABTG
SELEX
Nitta et al.(2015)
Poxm_1
0.708 0.708
Poxm
M03945_2.00
Drosophila melanogaster
NYSAWGCRTRACS

SGTYAYGCWTSRN
SELEX
Nitta et al.(2015)
Poxm_2
0.708 0.708
Poxm
M06436_2.00
Drosophila melanogaster
NNNNNNMVNHNRNSCRTGA

TCAYGSNYNDNBKNNNNNN
B1H
Zhu et al.(2011)
Poxm_SOLEXA_5_FBgn0003129
0.708 0.708
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ANCCAN_00243 Paired box 30 77

Links

Other Paired box family TFs
Other Ancylostoma caninum TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SVUK_0001011501 Strongylus vulgaris SVUK_0001011501 I 1.000
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.938
PAX6 Homo sapiens ENSG00000007372 D 0.917
BGLB007764 Biomphalaria glabrata BGLB007764 I 0.917
ANCCEY_08417 Ancylostoma ceylanicum ANCCEY_08417 I 0.889
augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf45992-processed-gene-0.0 I 0.882
Pax6 Mus musculus ENSMUSG00000027168 D 0.857
ANCDUO_03668 Ancylostoma duodenale ANCDUO_03668 N 0.842
ACHR009800 Anopheles christyi ACHR009800 I 0.812
ACUA027429 Anopheles culicifacies ACUA027429 I 0.812
spa-sv Drosophila pseudoobscura FBgn0249275 I 0.812
GK13586 Drosophila willistoni FBgn0215594 I 0.812
AMIN002123 Anopheles minimus AMIN002123 I 0.812
GJ13730 Drosophila virilis FBgn0200951 I 0.812
AMEM003247 Anopheles merus AMEM003247 I 0.812
AMEC016969 Anopheles melas AMEC016969 I 0.812
AFUN011579 Anopheles funestus AFUN011579 I 0.812
MESCA003563 Megaselia scalaris MESCA003563 I 0.812
ENSLACG00000013159 Latimeria chalumnae ENSLACG00000013159 I 0.812
GL18401 Drosophila persimilis FBgn0156002 I 0.812
PAX5 Callithrix jacchus ENSCJAG00000010379 I 0.812
AGAP000057 Anopheles gambiae AGAP000057 I 0.812
Pax5 Mus musculus ENSMUSG00000014030 D 0.812
PAX5 Homo sapiens ENSG00000196092 D 0.812
GI14046 Drosophila mojavensis FBgn0136800 I 0.812
GH23966 Drosophila grimshawi FBgn0131423 I 0.812
DAPPUDRAFT_38922 Daphnia pulex DAPPUDRAFT_38922 I 0.796
OESDEN_18680 Oesophagostomum dentatum OESDEN_18680 I 0.795
PTRK_0001603600 Parastrongyloides trichosuri PTRK_0001603600 I 0.792
SPAL_0000372000 Strongyloides papillosus SPAL_0000372000 I 0.792
SVE_0227200 Strongyloides venezuelensis SVE_0227200 I 0.792
pax2.L Xenopus laevis XB-GENE-486805 I 0.792
SSTP_0000522800 Strongyloides stercoralis SSTP_0000522800 I 0.792
HPLM_0000491501 Haemonchus placei HPLM_0000491501 I 0.792
LCUP013028 Lucilia cuprina LCUP013028 I 0.782
LCUP015670 Lucilia cuprina LCUP015670 I 0.768
L893_g11572 Steinernema glaseri L893_g11572 I 0.729
ANCCAN_01421 Ancylostoma caninum ANCCAN_01421 I 0.720
ENSONIG00000005161 Oreochromis niloticus ENSONIG00000005161 I 0.711
ENSTSYG00000008085 Tarsius syrichta ENSTSYG00000008085 I 0.709
PAX5 Tupaia belangeri ENSTBEG00000007983 I 0.709
PAX5 Tursiops truncatus ENSTTRG00000006049 I 0.709