CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
(
Meloidogyne floridensis
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
T312551_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0-mRNA-1
Paired box
53
180
GQGRMNQLGGVFINGRPLPQEKRVQIVEMSRRGVKPCKISRELKVSHGAVSKILMRYNETGSISPGQIGGNPRSRISIQAVRQYILSIYKEKIDQNISALQIQQILVERGICSQKNVPSTPRINRLLK
Links
Other
Paired box
family TFs
Other
Meloidogyne floridensis
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MhA1_Contig2347.frz3.gene2
Meloidogyne hapla
MhA1_Contig2347.frz3.gene2
N
0.936
OFLC_0000380401
Onchocerca flexuosa
OFLC_0000380401
I
0.761
SROB_0000822501
Schistosoma rodhaini
SROB_0000822501
I
0.726
PEQ_0000701201
Parascaris equorum
PEQ_0000701201
I
0.717
SMTD_0001918101
Schistosoma mattheei
SMTD_0001918101
I
0.710
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.700
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.700