CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig2347.frz3.gene2
(
Meloidogyne hapla
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
MhA1_Contig2347.frz3.gene2
T312788_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig2347.frz3.gene2
Paired box
57
184
GQGRMNQLGGVFINGRPLPHEKRVQIVEMARRGVKPCKISRELKVSHGAVSKILMRYNETGSISPGQIGGNPRSRISIQAVRQYILLIYNEKINQNISAQQIQQILVERGICSQKNVPSTPRISRLLK
Links
Other
Paired box
family TFs
Other
Meloidogyne hapla
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf05526-processed-gene-0.0
N
0.936
OFLC_0000380401
Onchocerca flexuosa
OFLC_0000380401
I
0.761
PEQ_0000701201
Parascaris equorum
PEQ_0000701201
I
0.717
SROB_0000822501
Schistosoma rodhaini
SROB_0000822501
I
0.710
SNAPOd2T00016386001
Oikopleura dioica
SNAPOd2T00016386001
I
0.700
ALUE_0001653201
Ascaris lumbricoides
ALUE_0001653201
I
0.700
ALUE_0000098101
Ascaris lumbricoides
ALUE_0000098101
I
0.700