CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MhA1_Contig239.frz3.gene35
(
Meloidogyne hapla
)
Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00292 (PAX)
IPR001523
MhA1_Contig239.frz3.gene35
T312789_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MhA1_Contig239.frz3.gene35
Paired box
25
71
WQKLTSQDVEEQIVKLARKGLRPSQIGVILRDSHGVAQVRRITGNKI
Links
Other
Paired box
family TFs
Other
Meloidogyne hapla
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI00506400
Haemonchus contortus
HCOI00506400
N
0.884
ANCCAN_06410
Ancylostoma caninum
ANCCAN_06410
N
0.884
ANCCEY_10735
Ancylostoma ceylanicum
ANCCEY_10735
N
0.884
ANCDUO_14679
Ancylostoma duodenale
ANCDUO_14679
N
0.884
HCOI00608900
Haemonchus contortus
HCOI00608900
N
0.884
HPLM_0001001001
Haemonchus placei
HPLM_0001001001
N
0.884
TELCIR_08212
Teladorsagia circumcincta
TELCIR_08212
N
0.884
OESDEN_19099
Oesophagostomum dentatum
OESDEN_19099
N
0.884
NECAME_16739
Necator americanus
NECAME_16739
N
0.884
genemark-nMf.1.1.scaf00604-processed-gene-0.10
Meloidogyne floridensis
genemark-nMf.1.1.scaf00604-processed-gene-0.10
N
0.867
DICVIV_11664
Dictyocaulus viviparus
DICVIV_11664
N
0.867
Minc00512
Meloidogyne incognita
Minc00512
N
0.867
TELCIR_25960
Teladorsagia circumcincta
TELCIR_25960
N
0.844
HPBE_0000407401
Heligmosomoides bakeri
HPBE_0000407401
N
0.844
GPLIN_000355200
Globodera pallida
GPLIN_000355200
N
0.822
NBR_0001294901
Nippostrongylus brasiliensis
NBR_0001294901
N
0.800
Minc02205
Meloidogyne incognita
Minc02205
N
0.800
CJA02893
Caenorhabditis japonica
CJA02893
N
0.800
CBN07460
Caenorhabditis brenneri
CBN07460
N
0.778
rps-13
Caenorhabditis elegans
WBGene00004482
N
0.778
CBG19687
Caenorhabditis briggsae
CBG19687
N
0.778
CRE03166
Caenorhabditis remanei
CRE03166
N
0.778